Gene SeSA_A3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3002 
SymbolhycD 
ID6518762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2902815 
End bp2903738 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID642748026 
Productformate hydrogenlyase subunit D 
Protein accessionYP_002115803 
Protein GI194736897 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.00604695 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGTGT TTTATCCGTT AATTCAGGCG CTGGTGCTAT TTGCCGTTGC GCCATTGCTG 
TCCGGTATTA CTCGCGTGGC ACGCGCCCGT CTACACAATC GCCGTGGGCC GGGCGTGTTG 
CAGGAGTACC GCGACATTAT CAAACTGCTC GGTCGTCAGA GTATTGCGCC TGCGGATTCC 
GGCTGGGTTT TTCGCCTGAC GCCGTTTGTG ATGGTCGGCG TGATGCTGAC TATCGCCACC 
GCGCTGCCGG TCGTCACCGT TGGATCTCCG TTGCCGCAAC TGGGTGATTT AATCACCCTG 
ATTTACCTGT TCGCCATCGC CCGTTTCTTC TTCTCTATTG CAGGCCTGGA TACCGGCAGT 
CCGTTCACTG CGATCGGCGC CAGCCGTGAA GCGATGCTCG GCGTGCTGGT GGAGCCGATT 
CTGCTGCTGG GTCTGTGGGT CGCCGCGCAG GTGGCGGGTT CAACTCATAT CAGCAATATC 
GCCGATACCA TTTATCACTG GCCTGTCGCG CGTAGTATTC CGCTGATTCT GGCGCTGTGC 
GCCTGCGCCT TCGCCACCTT TATCGAAATG GGCAAGCTGC CGTTCGACCT GGCGGAAGCG 
GAGCAGGAGT TGCAGGAAGG GCCGTTGACC GAATACAGCG GTAGCGGCTT TGCGGTGCTG 
AAATGGGGCA TCAGCCTTAA GCAACTGGTG GTGCTGCAAA TGTTCGTCGG CGTGTTTTTG 
CCGTGGGGAC AGATGGAAAC CTTCAGCGCA GGCGGACTGT TGCTGGCGCT GGTGATTGCC 
GTCGTCAAGC TGATTGTCGG CGTACTGGTG ATCGCCCTGT TTGAAAACAG CATGGCGCGA 
CTGCGTTTTT GCGCCACTTC ACGCGTGACC TGGGCCGGTT TTGGGTTTGC GTTTTTAGCC 
TTCGTCTCCT TGCTGGCGGC GTGA
 
Protein sequence
MSVFYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSIAPADS 
GWVFRLTPFV MVGVMLTIAT ALPVVTVGSP LPQLGDLITL IYLFAIARFF FSIAGLDTGS 
PFTAIGASRE AMLGVLVEPI LLLGLWVAAQ VAGSTHISNI ADTIYHWPVA RSIPLILALC 
ACAFATFIEM GKLPFDLAEA EQELQEGPLT EYSGSGFAVL KWGISLKQLV VLQMFVGVFL 
PWGQMETFSA GGLLLALVIA VVKLIVGVLV IALFENSMAR LRFCATSRVT WAGFGFAFLA 
FVSLLAA