Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3001 |
Symbol | hycE |
ID | 6519866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2901088 |
End bp | 2902797 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642748025 |
Product | formate hydrogenlyase subunit E |
Protein accession | YP_002115802 |
Protein GI | 194737308 |
COG category | [C] Energy production and conversion |
COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit [COG3262] Ni,Fe-hydrogenase III component G |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.33609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.016492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAG AAAAATTAGG TCAACAATAC CTTGCGGCGC TGCACCAGGC GTTTCCGGGC GTCGTGCTGG ACGAAGCCTG GCAGACCAAA GATCAGCTGA CTATTACGGT AAAAGTGAAC TATCTGCCGG AAGTGGTGGA GTTTCTTTAC TACCAGCAGG GTGGGTGGCT GTCGGTGCTG TTCGGTAATG ACGAACGCCA GTTGTGCGGC CACTATGCCG TTTATTACGT GCTGTCGATG GAGCAGGGCA CGAAGTGCTG GATTACCGTC CGCGTTGAAG TGGATGCCAA TAAGCTGGAA TTCCCATCCG TTACGCCGCG CGTGCCGGCT GCCGTGTGGG GTGAGCGCGA AGTACGCGAC ATGTACGGTT TAATCCCGGT CGGTCTGCCG GACGAGCGCC GTCTGGTGCT GCCGGACGAC TGGCCGGACG AGCTGTATCC GCTACGTAAA GACAGCATGG ATTATCGTCA GCGCCCGGCG CCGACCACCG ATGCGGAAAC CTACGAGTTC ATTAACGAGC TGGGTGACAA GAAAAATAAC GTGGTGCCGA TTGGCCCGCT GCATGTCACT TCCGATGAGC CGGGCCACTT CCGTCTGTTC GTCGATGGCG AAAACATTAT CGACGCCGAC TACCGCCTGT TCTATGTCCA CCGCGGCATG GAAAAACTGG CGGAAACCCG TATGGGTTAT AACGAAGTGA CGTTCCTGTC GGATCGCGTG TGTGGTATCT GCGGCTTCGC GCACAGCACC GCCTACACCA CTTCCGTGGA AAACGCGATG GGCATTCAGG TGCCGGAACG TGCGCAAATG ATCCGCGCTA TTCTGCTGGA AGTGGAACGT CTGCACTCGC ATCTGCTCAA CCTCGGCCTG GCCTGCCACT TTACCGGCTT TGACTCCGGC TTTATGCAGT TCTTCCGCGT GCGTGAAACC TCCATGAAGA TGGCGGAAAT ACTGACCGGG GCGCGCAAAA CTTACGGTCT GAACCTGATC GGCGGGATTC GCCGCGATCT GCTGAAAGAA GACATGATCC AGACCCGTCA ACTGGCGCAG CAGATGCGTC GTGACGTGCA GGAGCTGGTG GACATGCTGC TGAGCACGCC GAATATGGAA CAGCGTACCG TGGGTATCGG CCGTCTGGAC CCGGAAATTG CCCGTGACTT CAGTAATGTC GGCCCGATGG TGCGCGCCAG CGGTCACGCC CGCGACACCC GCGCCGACCA CCCGTTTGTC GGTTACGGTC TGCTGCCGAT GGAAGTACAT AGCGAGCAGG GCTGCGATGT GATTTCTCGT CTGAAAGTCC GTATCAACGA AGTCTACACC TCGCTGAATA TGATCGATTT CGGTCTGGAT AATCTGCCGG GCGGCCCGCT GATGGTGGAA GGCTTTACCT ATATTCCGCA CCGTTTTGCG CTCGGCTTCG CTGAAGCGCC GCGTGGTGAC GATATCCACT GGAGCATGAC CGGCGACAAC CAGAAGCTGT ACCGCTGGCG CTGCCGTGCG GCGACCTACG CCAACTGGCC GACGCTGCGC TATATGCTGC GCGGCAACAC CGTCTCCGAC GCGCCGCTGA TTATCGGCAG CCTCGACCCG TGCTACTCCT GTACCGACCG GATGACCGTG GTCGATGTGC GTAAGAAGAA GAGCAAAGTC GTGCCGTACA AAGAACTTGA GCGCTACAGC ATTGAGCGTA AAAACTCGCC GCTGAAATAA
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Protein sequence | MSEEKLGQQY LAALHQAFPG VVLDEAWQTK DQLTITVKVN YLPEVVEFLY YQQGGWLSVL FGNDERQLCG HYAVYYVLSM EQGTKCWITV RVEVDANKLE FPSVTPRVPA AVWGEREVRD MYGLIPVGLP DERRLVLPDD WPDELYPLRK DSMDYRQRPA PTTDAETYEF INELGDKKNN VVPIGPLHVT SDEPGHFRLF VDGENIIDAD YRLFYVHRGM EKLAETRMGY NEVTFLSDRV CGICGFAHST AYTTSVENAM GIQVPERAQM IRAILLEVER LHSHLLNLGL ACHFTGFDSG FMQFFRVRET SMKMAEILTG ARKTYGLNLI GGIRRDLLKE DMIQTRQLAQ QMRRDVQELV DMLLSTPNME QRTVGIGRLD PEIARDFSNV GPMVRASGHA RDTRADHPFV GYGLLPMEVH SEQGCDVISR LKVRINEVYT SLNMIDFGLD NLPGGPLMVE GFTYIPHRFA LGFAEAPRGD DIHWSMTGDN QKLYRWRCRA ATYANWPTLR YMLRGNTVSD APLIIGSLDP CYSCTDRMTV VDVRKKKSKV VPYKELERYS IERKNSPLK
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