Gene SeSA_A3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3000 
SymbolhycF 
ID6515671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2900536 
End bp2901078 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content56% 
IMG OID642748024 
Productformate hydrogenlyase complex iron-sulfur subunit 
Protein accessionYP_002115801 
Protein GI194738376 
COG category[C] Energy production and conversion 
COG ID[COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.397657 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0115018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACCT TTATCAAAAA AGTTATCAAA ACCGGCACAG CGACCTCGTC TTATCCGCTG 
GAGCCGATTG CGGTTGATAA AAACTTCCGC GGCAAGCCGG AACATAATCC GCAGCAGTGC
ATCGGCTGCG CCGCCTGCGT TAATGCCTGC CCGTCGAACG CGCTGACGGT GGAAACCGAT
CTCGCGACCA ATGAGCTGGC GTGGCAGTTC AATCTTAGCC GCTGCATCTT CTGCGGTCGC
TGCGAAGAGG TGTGCCCGAC GGCGGCGATT AAACTGTCGC AAGAGTACGA ACTGGCAGTG
TGGAAGAAAG AAGACTTCCT GCAACAGTCC CGCTTCGCGC TGTGCAACTG CCGCGTGTGC
AATCGTCCTT TCGCGGTACA GAAAGAGATT GACTACGCCA TTGCGCTGCT TGCGCACAAC
GGCGACAGCC GCGCGGAAAA CCACCGCGAA AGCTTTGAGA CCTGCCCGGA CTGTAAGCGT
CAGAAATGCC TGGTGCCGTC CGACCGTATT GAACTGACTC GCCATATGAA AGAGGTCAGC
TAA
 
Protein sequence
MFTFIKKVIK TGTATSSYPL EPIAVDKNFR GKPEHNPQQC IGCAACVNAC PSNALTVETD 
LATNELAWQF NLSRCIFCGR CEEVCPTAAI KLSQEYELAV WKKEDFLQQS RFALCNCRVC
NRPFAVQKEI DYAIALLAHN GDSRAENHRE SFETCPDCKR QKCLVPSDRI ELTRHMKEVS