| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2978 |
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| Symbol | alaS |
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| ID | 6515992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 2878565 |
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| End bp | 2881195 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642748002 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002115779 |
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| Protein GI | 194737652 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.471212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000181445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCAAGA GCACCGCTGA GATCCGTCAG GCGTTTCTCG ACTTTTTCCA TAGTAAAGGG
CATCAGGTAG TTGCCAGCAG TTCCCTGGTG CCTAACAATG ACCCCACTCT GTTGTTTACC
AATGCCGGGA TGAACCAGTT CAAGGATGTT TTCCTTGGGC TCGATAAACG TAATTATTCC
CGTGCAACCA CTTCCCAGCG TTGCGTACGC GCGGGGGGTA AACACAACGA TCTGGAAAAC
GTCGGATACA CTGCACGTCA CCATACTTTC TTCGAAATGC TGGGCAACTT CAGCTTCGGC
GATTACTTCA AACACGACGC CATTCAGTTC GCATGGGAAT TACTGACCGG TGAAAACTGG
TTTGCTCTGC CAAAAGAGCG TTTATGGGTC ACCGTCTATG AAACCGACGA CGAAGCCTAT
GAGATCTGGG AAAAAGAAGT CGGCATCCCG CGCGAGCGTA TCATCCGTAT CGGCGACAAT
AAAGGCGCGC CATACGCATC GGATAACTTC TGGCAGATGG GCGACACCGG TCCCTGCGGT
CCGTGCACCG AAATCTTCTA CGATCATGGC GACCACATCT GGGGCGGCCC TCCGGGAAGC
CCGGAAGAAG ACGGCGATCG CTATATTGAG ATCTGGAACA TCGTCTTTAT GCAGTTCAAC
CGTCAGGCTG ACGGGACGAT GGAACCATTG CCGAAACCGT CTGTAGATAC CGGTATGGGG
CTGGAGCGTA TTGCCGCGGT ACTGCAACAC GTTAACTCTA ACTATGACAT CGACCTGTTC
CGCACGTTGA TTGAAGCGGT AGCGAAAGTC ACCGGTGCCA CCGATCTGGG TAATAAATCG
CTGCGCGTTA TCGCCGACCA CATCCGTTCC TGCGCATTCC TGGTTGCCGA TGGCGTGCTG
CCGTCGAATG AAAACCGTGG CTATGTGCTG CGTCGCATTA TTCGTCGCGC GGTGCGTCAC
GGCAACATGC TGGGCGCGAA AGAGACCTTC TTCTACAAGC TGGTTGGGCC GCTGATTGAG
GTAATGGGCT CCGCAGGCGA AGAGTTGAAA CGTCAGCAGG CGCAGGTCGA GCAGGTTCTG
AAAACGGAAG AAGAGCAGTT CGCCCGTACG CTGGAGCGCG GTCTGGCGCT GCTGGATGAA
GAACTGGCGA AATTGCAGGG TGATACCCTG GACGGCGAAA CCGCTTTCCG TCTGTATGAT
ACTTATGGTT TCCCGGTCGA TTTAACGGCG GACGTCTGCC GTGAGCGCAA TATCAAAGTC
GACGAAGCCG GTTTTGAAGC AGCCATGGAA GAGCAACGCC GTCGCGCGCG CGAAGCTAGC
GGTTTTGGCG CGGACTACAA CGCGATGATC CGCGTTGATA GCGCTTCTGA ATTTAAAGGT
TATGACCATC TGGAACTGAA CGGCAAAGTG ACTGCGCTGT TTGTCGATGG TAAAGCGGTT
GAAGCGATTA ACGCGGGACA GGAAGCGGTT GTCGTGCTGG ATCAGACCCC ATTCTATGCG
GAATCAGGCG GTCAGGTTGG CGATAAAGGC GAGCTGAAAG GCGCTGGATT TACTTTCGCT
GTGGACGACA CGCAAAAATA TGGTCAGGCG ATTGGTCATA TCGGCAAATT GTCTGCGGGC
GCTCTGAAAG TGGGCGATGC GGTACAGGCT GACGTAGATG AAGCGCGCCG CGCACGTATC
CGTCTGAACC ACTCCGCCAC GCACCTGATG CACGCGGCGT TGCGCCAGGT GCTTGGGACA
CACGTTGCAC AGAAAGGTTC GCTGGTTAGC GATAAAGTGC TGCGCTTCGA CTTCTCGCAC
AATGAAGCGA TGAAGCCGTC GGAGATTCGT CAGGTTGAAG ATTTGGTGAA TGCGCAAATT
CGCCGCAACC TGCCGATTGA AACGAACATC ATGGATCTCG ACGCGGCGAA GGCGAAAGGC
GCCATGGCGC TGTTTGGCGA GAAATATGAC GAACGTGTAC GCGTTCTGAG CATGGGCGAT
TTCTCTACCG AACTGTGCGG CGGTACTCAC GCCAGTCGTA CCGGTGATAT CGGTCTATTC
CGTATTATCT CTGAGTCCGG CACCGCAGCG GGCATTCGTC GTATTGAGGC GGTAACCGGT
GAAGGCGCTA TGGCCACCGT TCATGCGCAA AGCGATCGCT TAAACGATAT TGCGCATCTG
CTGAAGGGCG ACAGCCAGAA TCTGGGCGAC AAAGTGCGTG CCGTGCTGGA ACGTACACGT
CAGCTGGAAA AAGAGTTGCA GCAGTTGAAG GACCAGGCCG CAGCGCAGGA GAGTGCAAAT
CTTTCCAGTA AAGCGGTCGA TCTCAACGGC GTGAAGCTCC TGGTCAGCGA GCTTGCTAGT
ATTGAGCCGA AAATGCTGCG AACCATGGTT GATGATCTGA AAAATCAACT GGGGTCTACC
GTTATCGTAC TGGCAACGGT TGTTGAAGGT AAGGTTTCTC TGATTGCGGG CGTGTCGAAG
GATGTGACCG ACCGGGTTAA AGCAGGGGAA TTGATTGGTA TGGTCGCTCA GCAGGTAGGC
GGTAAGGGTG GCGGTCGTCC GGACATGGCG CAAGCCGGTG GTACGGATGC GGCAGCTCTG
CCTGCAGCGT TAGCCAGTGT ACAAGGCTGG GTCAGCGCAA AATTGCAATA A
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| Protein sequence | MSKSTAEIRQ AFLDFFHSKG HQVVASSSLV PNNDPTLLFT NAGMNQFKDV FLGLDKRNYS
RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAIQF AWELLTGENW
FALPKERLWV TVYETDDEAY EIWEKEVGIP RERIIRIGDN KGAPYASDNF WQMGDTGPCG
PCTEIFYDHG DHIWGGPPGS PEEDGDRYIE IWNIVFMQFN RQADGTMEPL PKPSVDTGMG
LERIAAVLQH VNSNYDIDLF RTLIEAVAKV TGATDLGNKS LRVIADHIRS CAFLVADGVL
PSNENRGYVL RRIIRRAVRH GNMLGAKETF FYKLVGPLIE VMGSAGEELK RQQAQVEQVL
KTEEEQFART LERGLALLDE ELAKLQGDTL DGETAFRLYD TYGFPVDLTA DVCRERNIKV
DEAGFEAAME EQRRRAREAS GFGADYNAMI RVDSASEFKG YDHLELNGKV TALFVDGKAV
EAINAGQEAV VVLDQTPFYA ESGGQVGDKG ELKGAGFTFA VDDTQKYGQA IGHIGKLSAG
ALKVGDAVQA DVDEARRARI RLNHSATHLM HAALRQVLGT HVAQKGSLVS DKVLRFDFSH
NEAMKPSEIR QVEDLVNAQI RRNLPIETNI MDLDAAKAKG AMALFGEKYD ERVRVLSMGD
FSTELCGGTH ASRTGDIGLF RIISESGTAA GIRRIEAVTG EGAMATVHAQ SDRLNDIAHL
LKGDSQNLGD KVRAVLERTR QLEKELQQLK DQAAAQESAN LSSKAVDLNG VKLLVSELAS
IEPKMLRTMV DDLKNQLGST VIVLATVVEG KVSLIAGVSK DVTDRVKAGE LIGMVAQQVG
GKGGGRPDMA QAGGTDAAAL PAALASVQGW VSAKLQ
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