Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2963 |
Symbol | emrB |
ID | 6518910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2870294 |
End bp | 2871832 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642747989 |
Product | multidrug resistance protein B |
Protein accession | YP_002115771 |
Protein GI | 194738054 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00759012 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAACAGC AAAAACCGCT GGAAGGCGCG CAGCTCGTCA TCATGACGAT CGCGCTGTCG CTGGCGACAT TCATGCAGGT GCTGGACTCC ACCATTGCCA ACGTGGCGAT TCCGACCATC GCCGGGAACC TGGGTTCTTC CCTAAGCCAG GGGACATGGG TTATCACCTC TTTCGGGGTG GCGAACGCTA TCTCGATTCC CTTAACCGGC TGGCTGGCGA AACGTTTTGG CGAAGTCAAA CTGTTCATGT GGTCGACGGT CGCCTTTGCC GCAGCCTCCT GGGCCTGTGG CGTATCCAGC AGCCTGAATA TGCTGATCTT CTTCCGCGTG GTGCAGGGCG TGGTCGCCGG GCCGCTGATT CCGCTCTCGC AAAGCCTGTT GCTGAATAAC TATCCGCCTG CAAAGCGCTC CATTGCGCTG GCACTCTGGT CAATGACCGT CATTGTCGCG CCGATTTGCG GCCCGATTCT GGGGGGCTAT ATCAGTGATA ATTACCACTG GGGATGGATT TTCTTCATCA ACGTGCCGAT TGGCATCGCC GTCGTCCTGA TGACGTTACA CACGCTGCGC GGACGTGAAA CGCATACCGA ACGGCGACGT ATTGACGCCG TCGGGCTGGC GTTACTGGTG ATTGGCATCG GCAGCCTGCA AATTATGCTC GACCGCGGTA AAGAACTGGA CTGGTTCTCC TCGCAGGAAA TTATCATCCT GACCGTGGTC GCCGTCATCG CCATCAGTTT CCTGATCGTC TGGGAACTGA CCGACGATCA CCCTATCGTC GATCTTTCTC TTTTTAAATC GCGTAACTTC ACTATTGGCT GCTTGTGCAT CAGCCTTGCC TATATGCTCT ATTTCGGCGC CATTGTTCTA CTGCCGCAGC TTTTGCAAGA GGTGTACGGC TATACCGCAA CGTGGGCAGG TCTGGCGTCG GCGCCAGTCG GTATTATTCC GGTAATTTTG TCGCCGATTA TCGGACGCTT CGCGCATAAA CTGGATATGC GCAGGCTGGT CACGTTCAGC TTCATTATGT ACGCCGTCTG TTTTTACTGG CGCGCCTGGA CGTTCGAACC GGGTATGGAT TTCGGCGCTT CCGCATGGCC GCAGTTTATT CAGGGATTTG CCGTCGCCTG CTTCTTCATG CCGCTGACCA CCATTACGCT CTCCGGGTTA CCGCCCGAAC GGCTGGCGGC GGCATCAAGC CTGTCGAACT TCACGCGAAC GCTGGCAGGT TCAATTGGCA CCTCGATTAC CACCACTATG TGGACCGATC GTGAGTCGCT ACACCATGCT CAGCTCACGG AGTCGATTAC GGCGTATAAT CCAAACGCTC AGGCTATGTA CGATAAACTG GAAGGCTTAG GGATGACGCA CCAACAGGCG TCAGGCTGGA TAGCCCAGCA AATCACGAAT CAGGGGCTGA TTATTTCCGC CAACGAAATC TTCTGGATGT CGGCGGGGAT CTTCCTGGTG CTGCTCGGCC TGGTGTGGTT CGCCAAACCG CCCTTCGGTG CGGGCGGCGG CGGCGGCGGC GCGCACTAA
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Protein sequence | MQQQKPLEGA QLVIMTIALS LATFMQVLDS TIANVAIPTI AGNLGSSLSQ GTWVITSFGV ANAISIPLTG WLAKRFGEVK LFMWSTVAFA AASWACGVSS SLNMLIFFRV VQGVVAGPLI PLSQSLLLNN YPPAKRSIAL ALWSMTVIVA PICGPILGGY ISDNYHWGWI FFINVPIGIA VVLMTLHTLR GRETHTERRR IDAVGLALLV IGIGSLQIML DRGKELDWFS SQEIIILTVV AVIAISFLIV WELTDDHPIV DLSLFKSRNF TIGCLCISLA YMLYFGAIVL LPQLLQEVYG YTATWAGLAS APVGIIPVIL SPIIGRFAHK LDMRRLVTFS FIMYAVCFYW RAWTFEPGMD FGASAWPQFI QGFAVACFFM PLTTITLSGL PPERLAAASS LSNFTRTLAG SIGTSITTTM WTDRESLHHA QLTESITAYN PNAQAMYDKL EGLGMTHQQA SGWIAQQITN QGLIISANEI FWMSAGIFLV LLGLVWFAKP PFGAGGGGGG AH
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