Gene SeSA_A2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2940 
Symbol 
ID6518132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2852277 
End bp2852726 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content44% 
IMG OID642747966 
ProductLysM domain/BON superfamily protein 
Protein accessionYP_002115748 
Protein GI194735575 
COG category[S] Function unknown 
COG ID[COG1652] Uncharacterized protein containing LysM domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.137331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTT TCAATTTTGT AAAAGATGCA GGTGAAAAAC TCTGGGACGC GGTAACCGCT 
AATCATGATA AGGACGATCA GGCGAAAAAA GTCCAGGAAC ATTTAAATAA AACGGGAATA 
CCCGACGCTG ACAAAGTGAA TGTGCAAATT GCGGATGGAA AAGCGACAGT GACGGGTGAT 
GGGCTGAGTC AGGAGGCAAA AGAAAAAATT CTGGTTGCCG TGGGGAATAT CGCCGGGATT 
AGCAGCGTTG ACGATCAGGT TAAAACCACG ACGCCAGCGG CTGAAAGTCA GTTTTATACC 
GTAAAATCAG GCGACACCCT GAGCGCTATT TCAAAGCAAG TGTATGGTAA CGCCAATCTG 
TATAATAAAA TCTTCGAGGC AAATAAACCG ATGCTGAAAA GCCCGGAAAA AATATATCCG 
GGACAAGTGT TGCGTATTCC TGAAGAATAA
 
Protein sequence
MGLFNFVKDA GEKLWDAVTA NHDKDDQAKK VQEHLNKTGI PDADKVNVQI ADGKATVTGD 
GLSQEAKEKI LVAVGNIAGI SSVDDQVKTT TPAAESQFYT VKSGDTLSAI SKQVYGNANL 
YNKIFEANKP MLKSPEKIYP GQVLRIPEE