Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2937 |
Symbol | gabT |
ID | 6515350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2848722 |
End bp | 2850005 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642747963 |
Product | 4-aminobutyrate aminotransferase |
Protein accession | YP_002115745 |
Protein GI | 194736886 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.735836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.115833 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA ATCACGCTTT AATGCAGCGC CGTCATAACG CCGTTCCTCG CGGCGTGGGC CAGATTCACC CGATTTTCGC CGAGCGGGCG GAAAATTGTC GGGTCTGGGA TGTCGAAGGC CGTGAGTATC TCGATTTCGC GGGCGGCATT GCCGTCCTGA ACACCGGTCA TTTACATCCG GGCATTGTTT CAGCGGTCGA AGCGCAGCTG AAGAAATTGT CGCATACCTG TTTTCAGGTG CTGGCCTATG AACCGTATCT GGCGTTGTGC GAACGCATGA ACCAGAAGGT ACCGGGCGAT TTCGCCAAAA AAACGTTGCT GGTCACGACC GGTTCAGAAG CGGTTGAAAA CGCCGTGAAA ATCGCCCGCG CGGCGACAAA ACGCAGCGGC GCTATCGCGT TTAGCGGCGC TTACCACGGT CGTACCCACT ACACGCTCTC TCTGACCGGG AAAGTACACC CGTACTCTGC TGGTATGGGA TTGATGCCAG GCCATGTCTA CCGCGCACTT TATCCTTGCC CGCTACACAA CATCAGCGAC GACGACGCGA TCGCCAGCAT TGAACGCATC TTTAAAAATG ATGCCGCGCC GGAAGATATC GCCGCCATTA TTATTGAGCC GGTACAGGGC GAAGGCGGAT TTTACGCTGC CTCTCCCGCG TTTATGCAGC GACTGCGCGC GCTATGCGAC CAACACGGCA TTATGTTGAT TGCCGACGAA GTGCAAAGCG GCGCGGGCCG GACCGGTACG CTGTTCGCCA TGGAACAGAT GGGCGTTGCG GCAGATATTA CCACGTTTGC GAAATCGATC GCCGGCGGCT TTCCGCTGGC AGGCGTTACC GGCCGGGCAG ACGTGATGGA CGCTATCGCG CCGGGCGGTC TGGGCGGCAC CTATGCCGGA AACCCGATTG CCTGCGCCGC CGCGCTGGCG GTACTGGACA TTTTCGAGCA GGAAAATCTA CTGCAAAAGG CAAATACGCT TGGCAAAACG CTGCGCGATG GCCTGATGGA GATAGCGGAA ACGCACCGTG AGATTGGCGA CGTGCGCGGA CTGGGCGCCA TGATCGCCAT TGAGTTGTTC GAAAATGGCG ACCCCGGCAA ACCGAACGCG GCTCTGACCG CCGACATTGT GGCCCGCGCC CGCGAGAAAG GGTTAATTCT GCTCTCCTGC GGTCCTTACT ACAACATCTT GCGCATCCTC GTTCCACTCA CTATTGAGGC CTCGCAGATT CGGCAAGGCC TGGAGATTAT CGCCCAGTGC TTTGATGAGG CGAAACAAGC GTAA
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Protein sequence | MNTNHALMQR RHNAVPRGVG QIHPIFAERA ENCRVWDVEG REYLDFAGGI AVLNTGHLHP GIVSAVEAQL KKLSHTCFQV LAYEPYLALC ERMNQKVPGD FAKKTLLVTT GSEAVENAVK IARAATKRSG AIAFSGAYHG RTHYTLSLTG KVHPYSAGMG LMPGHVYRAL YPCPLHNISD DDAIASIERI FKNDAAPEDI AAIIIEPVQG EGGFYAASPA FMQRLRALCD QHGIMLIADE VQSGAGRTGT LFAMEQMGVA ADITTFAKSI AGGFPLAGVT GRADVMDAIA PGGLGGTYAG NPIACAAALA VLDIFEQENL LQKANTLGKT LRDGLMEIAE THREIGDVRG LGAMIAIELF ENGDPGKPNA ALTADIVARA REKGLILLSC GPYYNILRIL VPLTIEASQI RQGLEIIAQC FDEAKQA
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