Gene SeSA_A2892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2892 
Symbol 
ID6520040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2797034 
End bp2798305 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content44% 
IMG OID642747922 
Productphage integrase family protein 
Protein accessionYP_002115704 
Protein GI194736662 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.196545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACCCA CTAAGAAGGG TCCAAAAACC GAGGGTCCCC AAATGGCAAA AATCGCTAAG 
AAGCTCACTG ACACTGAAAT CAAAAGCACC AAGCCAGCCG ACAAAGAAAT CAACTTGTTT 
GACGGAGATG GTTTGATACT ACGAATCGCT CCCCTCTCGA AAGGAGGAAA GAAGAATTGG 
TATTTCAGGT ATGCAGTGCC AGTCAGTAAA AAAAGAACCA AAATGAGCCT TGGGACCTAT 
CCTCACCTTA CACTTGCAAG AGCCAGAGCC TTACGAGATG AATATCTTTC CTTGCTTGCT 
AATGGCATTG ATCCCCAAGT TCATAACAAC GATAAAGCTA ATGCCTTAAA GAATGCTACT 
GAACACACTC TCCAGGCCGT GGCAAGGAAA TGGTTGGATG AGAAGGTAAA GACCTCAGGT 
ATCTCACAAG ACCATGCAGA AGACATCTGG CGGAGCCTTG AACGAAATAT TTTACCCGGT 
CTGGGTAATG TGCCAATCAA TGAGATCCGT CCCAAGCTCT TAAAACAGCA TCTTGATCCA 
ATTGAACAAC GAGGAGTACT GGAAACTTTG CGACGGCTCA TTTCCAGGTT GAATGAAATT 
TTCCGTTGGG CGGCTACAGA AGAGCTGATT GAATTTAACC CCGCAGATAA TCTGAGCCAA 
CGTTTCAGTA AGCCTAAAAA GCAGAATATG CCTGCCCTAC CCCCCTCTGA ACTCCCTCGC 
TTTCTGGCAG CACTGAACAA TGCATCTGTC CGTTTAGAAA CAAGACTACT GATTGAATGG 
CAACTTCTCA CATGGGTTCG CCCCGGTGAA GCTGTCCGCG CAAGATGGTC TGATATAGAT 
ATGGATAACA GCATGTGGAA CATCCCGGCT GAATTTATGA AGATGAAAAA ACCTCATAAG 
GTTCCATTAA GCAAAGAATC TCTTCGGATA CTTAAATCTA TGGAATCAAT CAGTGGGCAT 
CGCGAATGGG TATTTCCCAG TATAAAAGCC CCACTCAATC ATATGCATGA ACAGACAGCT 
AACGCAGCAA TTATCCGTAT GGGATTTGGT GGTGAGCTTG TGGCACATGG AATGCGATCT 
ATAGCAAGAA CGGCAGCAGA AGAATCAGGA AAATTCAGGA CCGAGGTGCT CGAAGCAGCA 
CTTGCCCACT CTAAAAAGGA CGAAATCATT GCAGCATATA ATCGTGCGGA ATATATTTCA 
GAAAGAGAAA AACTTATGCA ATGGTGGAGT AATTATATTC AGTCACAACG ACTTAAAACT 
ATCGCAGCCT AA
 
Protein sequence
MGPTKKGPKT EGPQMAKIAK KLTDTEIKST KPADKEINLF DGDGLILRIA PLSKGGKKNW 
YFRYAVPVSK KRTKMSLGTY PHLTLARARA LRDEYLSLLA NGIDPQVHNN DKANALKNAT 
EHTLQAVARK WLDEKVKTSG ISQDHAEDIW RSLERNILPG LGNVPINEIR PKLLKQHLDP 
IEQRGVLETL RRLISRLNEI FRWAATEELI EFNPADNLSQ RFSKPKKQNM PALPPSELPR 
FLAALNNASV RLETRLLIEW QLLTWVRPGE AVRARWSDID MDNSMWNIPA EFMKMKKPHK 
VPLSKESLRI LKSMESISGH REWVFPSIKA PLNHMHEQTA NAAIIRMGFG GELVAHGMRS 
IARTAAEESG KFRTEVLEAA LAHSKKDEII AAYNRAEYIS EREKLMQWWS NYIQSQRLKT 
IAA