Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2869 |
Symbol | trmD |
ID | 6515413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2767925 |
End bp | 2768692 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642747902 |
Product | tRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_002115684 |
Protein GI | 194738207 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0122214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTATTG GCATAGTTAG CCTGTTTCCT GAAATGTTCC GCGCAATTAC CGATTACGGG GTAACTGGCC GGGCAGTAAA AAAAGGCCTG CTGAACATCC AAAGCTGGAG TCCTCGCGAC TTCACGCATG ACCGGCACCG TACCGTGGAC GATCGTCCTT ACGGCGGCGG ACCGGGGATG TTAATGATGG TGCAACCCTT GCGGGACGCC ATTCACGCAG CAAAAGCCGC GGCAGGTGAA GGCGCTAAAG TGATTTATCT GTCGCCTCAG GGACGCAAGC TTGATCAAGC GGGCGTTAGC GAGCTGGCCA CGAATCAGAA ACTCATTCTG GTGTGTGGTC GCTACGAAGG CGTAGATGAG CGCGTAATTC AGACCGAAAT TGATGAAGAA TGGTCAATTG GCGATTACGT TCTCAGCGGT GGCGAACTAC CGGCAATGAC GCTGATTGAC TCCGTCGCCC GGTTTATACC GGGAGTTCTG GGGCATGAAG CATCAGCAAT CGAAGATTCG TTTGCTGATG GGTTGCTGGA TTGTCCGCAC TATACGCGCC CTGAAGTGTT AGAGGGGATG GAAGTACCGC CAGTATTGCT GTCGGGAAAC CATGCCGAGA TACGTCGCTG GCGTTTGAAA CAGTCGCTGG GCCGAACCTG GCTTAGAAGA CCTGAACTTC TGGAAAACCT GGCTCTGACT GAAGAGCAAG CAAGGTTGCT GGCGGAGTTC AAAACAGAAC ACGCACAACA GCAGCATAAA CATGATGGGA TGGCATAG
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Protein sequence | MFIGIVSLFP EMFRAITDYG VTGRAVKKGL LNIQSWSPRD FTHDRHRTVD DRPYGGGPGM LMMVQPLRDA IHAAKAAAGE GAKVIYLSPQ GRKLDQAGVS ELATNQKLIL VCGRYEGVDE RVIQTEIDEE WSIGDYVLSG GELPAMTLID SVARFIPGVL GHEASAIEDS FADGLLDCPH YTRPEVLEGM EVPPVLLSGN HAEIRRWRLK QSLGRTWLRR PELLENLALT EEQARLLAEF KTEHAQQQHK HDGMA
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