Gene SeSA_A2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2817 
Symbol 
ID6515833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2720520 
End bp2721716 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content47% 
IMG OID642747852 
Productmajor facilitator family transporter 
Protein accessionYP_002115637 
Protein GI194734416 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2223] Nitrate/nitrite transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0448046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.764982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCAT CAATCAACCG CTGGGGAATG CTTGCCGCTC ACGTGTGCAT CAATTTTGTG 
CTCGGGGGCG TCTACGCATT TAGCTATTTC AAAACACCAC TCATGGCGCA ATATCACTGG 
GATCCGGCTA CGCTGGCGTT AGCATTCTCT ATCAACATGG GGATCATTCC TTTACCGATG 
ATTTGGGGCG GGAGAATGAT CGACAATGGT AAAGGAAAGC AGGCGATAGT TATCGGCGGT 
ATCCTGTTTT CTTTAGGTTT TATCTTGTCC GGGTTTGTGG ATAATTTGCC CATGCTGTTT 
TTAACCTACG GCGTCATTGC CGGGTTGGGA TCGGGCCTGG CTTTTACGGG TAATCTGAAT 
AATATTCTGA AATTTTTCCC TGACCGTCGC GGTCTTGCCA GCGGTATCGT ACTGGCGGGT 
GTTGGCGTCG GGACGCTACT TTGCACCCGC CTGGCCGAAT ATTTTATGGC GCAAACTCAC 
GATGTTAGTC GGGCGTTGTT ATATCTGGGC ATTGTTTATC TGGTGGTTAT TTTTATCGTC 
CAGTTCTTTA TTCGTAGCGC GCCAGCAAAA GATAGCGGAG GAATTAAAGC ATCGCCAATG 
GATAAAGACT ATCGGCACAT GCTGAAAGAT CTGCGCTTCT GGCTGCTGTT TATGATTCTG 
GCGCTGGGCG TGTTCTCTGG GATGGTAATT AGCTCAAGCT CTGCGCAAAT TGGTATGACG 
CAGTACGGTT TACTGTCCGG TGCATTAGTC GTTAGCCTGG TATCGATATT TAACTCAATT 
GGTCGCCTGT TCTGGGGAGG GTTAACCGAT AAATTAGGCG GCTACAATAC TCTGGTTATC 
GTTTATCTTT TTACCTGCGT CTGTATGCTG CTATTGTTGT TCTTCAACGG CAATACTTCG 
GTATTCTATT TCAGCGCTCT GGGCGTGGGC TTTGCTTATG CCGGTATATT AGTTATCTTC 
CCTGGCTTGA CCAGCCAGAA TTTTGGTATG CGTAACCAGG GACTAAACTA CGGCTTTATG 
TATTTTGGTT TTGCCGTCGG TGCGGTTATT GCTCCTTACG TCACGTCCGC TATTGCAAAA 
TATACCGGAA GCTACAATAC GGTATTTATT TTGACCACGG TGCTATTGCT TATTGGAGTC 
GTGTTGACCC TGATAACGAA AAAATATGTC GCAACGGTTT TAGCCAAAAT TTATTAA
 
Protein sequence
MSASINRWGM LAAHVCINFV LGGVYAFSYF KTPLMAQYHW DPATLALAFS INMGIIPLPM 
IWGGRMIDNG KGKQAIVIGG ILFSLGFILS GFVDNLPMLF LTYGVIAGLG SGLAFTGNLN 
NILKFFPDRR GLASGIVLAG VGVGTLLCTR LAEYFMAQTH DVSRALLYLG IVYLVVIFIV 
QFFIRSAPAK DSGGIKASPM DKDYRHMLKD LRFWLLFMIL ALGVFSGMVI SSSSAQIGMT 
QYGLLSGALV VSLVSIFNSI GRLFWGGLTD KLGGYNTLVI VYLFTCVCML LLLFFNGNTS 
VFYFSALGVG FAYAGILVIF PGLTSQNFGM RNQGLNYGFM YFGFAVGAVI APYVTSAIAK 
YTGSYNTVFI LTTVLLLIGV VLTLITKKYV ATVLAKIY