| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2783 |
|---|
| Symbol | iscS |
|---|
| ID | 6516804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2682642 |
|---|
| End bp | 2683856 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642747820 |
|---|
| Product | cysteine desulfurase |
|---|
| Protein accession | YP_002115605 |
|---|
| Protein GI | 194738138 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS
[TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0158517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAC CGATTTATCT CGACTACTCC GCAACCACGC CGGTGGACCC GCGTGTTGCC
GAGAAAATGA TGCAGTTTCT GACCCTGGAC GGAACCTTTG GGAACCCGGC GTCTCGTTCA
CACCGTTTCG GCTGGCAGGC TGAAGAGGCG GTAGATATCG CCCGTAACCA GATTGCTGAA
CTGGTCGGTG CCGACCCGCG TGAAATCGTC TTTACCTCAG GGGCGACGGA GTCCGATAAC
CTGGCGATCA AAGGCGCTGC CAACTTTTAT CAGAAAAAAG GCAAGCACAT CATCACCAGC
AAGACCGAGC ACAAAGCGGT GCTGGACACC TGCCGTCAGC TTGAGCGCGA AGGGTTTGAA
GTGACCTACC TGGCGCCGCA GCGCAACGGC ATCATCGATC TCAACGAGCT CGAAGCAGCG
ATGCGTGACG ACACCATTCT GGTTTCCATC ATGCACGTGA ACAACGAAAT CGGCGTGGTG
CAGGATATCG CAACCATCGG CGAAATGTGC CGCGCGCGCG GTATCATCTA CCACGTTGAC
GCCACCCAGA GCGTGGGCAA ACTGCCTATC GACCTGAGCC AACTGAAAGT GGATCTGATG
TCCTTCTCCG GTCATAAAAT TTATGGTCCG AAAGGCATTG GCGCGCTGTA TGTGCGTCGT
AAGCCGCGTA TTCGCATTGA AGCGCAGATG CATGGCGGCG GGCACGAACG CGGTATGCGC
TCTGGTACTC TGCCTGTCCA CCAGATCGTC GGCATGGGCG AAGCTTACCG TATCGCGAAA
GAAGAGATGG AGACCGAAAT GGCCCGTCTG CGCGGTCTGC GTAACCGTCT GTGGAACGGC
ATCAAAGATA TTGAAGAAGT TTACCTGAAC GGCGACCTTG AGCAGGGCGC GCCAAACATT
CTCAACGTGA GCTTTAACTA CGTTGAAGGC GAGTCGCTGA TCATGGCGCT GAAAGACCTG
GCGGTCTCTT CCGGTTCCGC CTGCACCTCC GCCAGTCTGG AACCGTCCTA CGTGCTGCGC
GCGTTGGGCA TGAATGACGA ACTGGCGCAT AGCTCTATCC GTTTCTCTTT AGGTCGTTTT
ACCACTGAAG AAGAGATCGA CTACGCCATT GATCTGGTTC GTAAATCCAT TGGCCGTCTG
CGTGACCTTT CTCCACTGTG GGAAATGTAC AAGCAGGGTG TGGATCTGAA CAGCATCGAA
TGGGCACATC ATTAA
|
|---|
| Protein sequence | MKLPIYLDYS ATTPVDPRVA EKMMQFLTLD GTFGNPASRS HRFGWQAEEA VDIARNQIAE
LVGADPREIV FTSGATESDN LAIKGAANFY QKKGKHIITS KTEHKAVLDT CRQLEREGFE
VTYLAPQRNG IIDLNELEAA MRDDTILVSI MHVNNEIGVV QDIATIGEMC RARGIIYHVD
ATQSVGKLPI DLSQLKVDLM SFSGHKIYGP KGIGALYVRR KPRIRIEAQM HGGGHERGMR
SGTLPVHQIV GMGEAYRIAK EEMETEMARL RGLRNRLWNG IKDIEEVYLN GDLEQGAPNI
LNVSFNYVEG ESLIMALKDL AVSSGSACTS ASLEPSYVLR ALGMNDELAH SSIRFSLGRF
TTEEEIDYAI DLVRKSIGRL RDLSPLWEMY KQGVDLNSIE WAHH
|
|---|
| |