Gene SeSA_A2558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2558 
Symbol 
ID6517115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2443224 
End bp2444162 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content53% 
IMG OID642747607 
ProductHTH-type transcriptional regulator PecT 
Protein accessionYP_002115399 
Protein GI194735113 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.75067e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAATG CAAATCGTCC GATAATTAAC CTCGATCTCG ATCTGCTGAG AACGTTCGTG 
GCCGTTGCCG ATCTGAACAC CTTCGCCGCG GCGGCGGCGG CGGTATGTCG TACTCAGTCT
GCGGTCAGTC AGCAAATGCA GCGTCTTGAG CAACTCGTGG GAAAGGAATT GTTCGCCCGC
CATGGCCGTA ACAAACTTTT GACCGAACAC GGTATCCAGC TTCTGGGGTA CGCCAGAAAA
ATCCTGCGTT TTAATGATGA GGCGTGTTCA TCATTAATGT TCAGTAATCT TCAGGGAGTG
TTAACAATCG GCGCTTCTGA TGAATCAGCT GATACTATCC TGCCTTTTTT GCTTAGCCGA
ATCAGCTCGG TTTATCCGAA ACTCGCGCTT GATGTACGGG TAAAACGCAA CGCCTATATG
GTGGACATGG TTAAATCGCA GGAAGTAGAT TTGGTGGTGA CGACTAACCA ACCTCATTCG
CTGGACTGTC TGAATTTGCG GACCTCGCCC ACCCATTGGT ATTGTGCGGC TGAGTATGTT
TTGCAAAGGG GAGAGCCCGT ACCATTAGTC CTGCTGGACG ATCCCAGCCC ATTCCGCGAT
ATGGTGCTGG AGACGCTAAA TGCAGCGGGT ATTCCCTGGC GGCTGGCCTA TGTGGCGTCT
ACATTACCGG CGGTACGCGC GGCCGTTAAA GCTGGTCTTG GCGTAACGGC TCGACCTGTC
GAAATGATGA GTCCCGACCT TCGCGTGCTG GGCGTCGCAG ACGGATTACC GCCTTTGCCG
GATACGGAAT ATCTGTTGTG CCGCGATCCC AATAGCCAGA ACGAGCTGGC GATGGTGATT
TTCCATGCGA TGGAAAGCTA TCAAAACCCA TGGCATTACA ACCAGTTTTC TGCAGAGGGC
GGAGATGATC CGCTGATGGT GGAAGGGGGT TTTGAGTAG
 
Protein sequence
MINANRPIIN LDLDLLRTFV AVADLNTFAA AAAAVCRTQS AVSQQMQRLE QLVGKELFAR 
HGRNKLLTEH GIQLLGYARK ILRFNDEACS SLMFSNLQGV LTIGASDESA DTILPFLLSR
ISSVYPKLAL DVRVKRNAYM VDMVKSQEVD LVVTTNQPHS LDCLNLRTSP THWYCAAEYV
LQRGEPVPLV LLDDPSPFRD MVLETLNAAG IPWRLAYVAS TLPAVRAAVK AGLGVTARPV
EMMSPDLRVL GVADGLPPLP DTEYLLCRDP NSQNELAMVI FHAMESYQNP WHYNQFSAEG
GDDPLMVEGG FE