Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2537 |
Symbol | menD |
ID | 6519224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2421528 |
End bp | 2423198 |
Gene Length | 1671 bp |
Protein Length | 556 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642747587 |
Product | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase |
Protein accession | YP_002115379 |
Protein GI | 194737329 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.135401 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGTAA GTGCATTTAA CCGGCGCTGG GCGGCGGTCA TCCTGGAAGC CTTAACCCGT CATGGCGTCA GGCATGTTTG TATCGCCCCT GGTTCCCGTT CCACGCCGCT CACGTTGGCG GCGGCAGAGA ATCCTGCTTT TATTCACCAT ACGCACTTTG ATGAGCGTGG GCTTGGTCAT CTGGCGTTAG GGCTGGCGAA AGTCAGCCAA CAGCCTGTTG CCGTTATTGT CACTTCAGGT ACCGCCGTGG CGAACCTCTA TCCGGCCTTG ATTGAGGCGG GGCTGACGGG CGAGAAGCTT ATTTTACTTA CCGCCGATCG CCCGCCGGAG CTGATTGACT GCGGCGCCAA CCAGGCGATC CGTCAGGCGG GGATGTTTTC CTCGCACCCC TCCCAAACTC TGTCGTTGCC GCGTCCCACG CAGGATATTC CGGCGCGCTG GCTGGTGTCG ACCATCGATA ATGCGCTCGC CATGCTTCAT GCGGGCGCTC TGCACATTAA CTGTCCTTTT GCCGAACCGC TGTATGGCGA TATGAATGAC ACCGGCCTGG TCTGGCAGCA GCGTCTCGGC GACTGGTGGC AGGATGAAAA ACCCTGGCTG CGCGAAGCGC GTCGACTGGC AAGCGACAAA CAGCGCGACT GGTTCTTCTG GCGACAAAAA CGCGGCGTCG TCGTCGCCGG GCGTATGAGC GCGGAAGAAG GCAAAAAAGT GGCGCAGTGG GCGCAAACTC TGGGATGGCC ATTAATTGGC GACGTATTGT CGCAAACCGG GCAGCCGCTG CCGTGCGCCG ACCTGTGGCT CGGCAACGCC AAAGCGGTGA CCGAACTGCA GCAGGCGCAA ATTGTCGTCC AGCTTGGCAG TAGCCTTACC GGAAAACGCT TACTGCAATG GCAGGCAACC TGCGAGCCGG AAGAGTATTG GGTAATCGAC AATATTGAAG GTCGTCTGGA CCCGGCGCAC CATCGTGGAC GCAGACTGAT AGCGAAAATC GCCGACTGGC TGGAGATGCA TCCGGCGGAA AAACGTAAAC CGTGGTGTGT AGAGATCCCG CGTCTGGCGG AACTGGCGTG GCAACGGGTG GTCGCGCAGC GAGACACCTT TGGCGAAGCA CAGCTGGCGC ACCGTATCCG CGACTATCTG CCGGAGCAGG GGCAATTGTT CGTGGGCAAT AGTCTGGTGG TGCGTCTGAT CGACGCGCTG TCGCAGTTGC CGGCTGGCTA TCCGGTATAC AGCAATCGCG GGGCGAGCGG CATTGACGGC CTGCTTTCCA CAGCGGCGGG CGTGCAGCGC GCCAGCGCCA AATCGACGCT GGCTATCGTC GGCGATTTAT CCGCGCTGTA CGATCTTAAC GCGCTGGCGT TACTACGTCA GGTATCCGCG CCGTTTGTGT TGATTGTGGT CAACAATAAC GGCGGGCAGA TCTTTTCCCT GCTGCCGACG CCGCAAAGCA AACGTGAGCG CTTTTATTTG ATGCCGCAAA ACGTCCATTT TGACCATGCG GCCGCCATGT TTAACCTGCG CTATCATCGC CCGGAAAACT GGGAAGAACT GGAGTCTGCG CTGGCTGGCG CGTGGCGAAC CCCGGCGACG ACGGTGATTG AGCTGGTGGT AAACGATACG GACGGCGCGC AGACGTTGCA GCAACTTTTG GCTCAGGTAA GCCATCTATG A
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Protein sequence | MSVSAFNRRW AAVILEALTR HGVRHVCIAP GSRSTPLTLA AAENPAFIHH THFDERGLGH LALGLAKVSQ QPVAVIVTSG TAVANLYPAL IEAGLTGEKL ILLTADRPPE LIDCGANQAI RQAGMFSSHP SQTLSLPRPT QDIPARWLVS TIDNALAMLH AGALHINCPF AEPLYGDMND TGLVWQQRLG DWWQDEKPWL REARRLASDK QRDWFFWRQK RGVVVAGRMS AEEGKKVAQW AQTLGWPLIG DVLSQTGQPL PCADLWLGNA KAVTELQQAQ IVVQLGSSLT GKRLLQWQAT CEPEEYWVID NIEGRLDPAH HRGRRLIAKI ADWLEMHPAE KRKPWCVEIP RLAELAWQRV VAQRDTFGEA QLAHRIRDYL PEQGQLFVGN SLVVRLIDAL SQLPAGYPVY SNRGASGIDG LLSTAAGVQR ASAKSTLAIV GDLSALYDLN ALALLRQVSA PFVLIVVNNN GGQIFSLLPT PQSKRERFYL MPQNVHFDHA AAMFNLRYHR PENWEELESA LAGAWRTPAT TVIELVVNDT DGAQTLQQLL AQVSHL
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