Gene SeSA_A2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2493 
Symbol 
ID6516712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2371221 
End bp2372357 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content53% 
IMG OID642747548 
Productouter membrane porin protein C 
Protein accessionYP_002115340 
Protein GI194736918 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTA AAGTACTGTC CCTCCTGGTA CCAGCTCTGC TGGTGGCAGG CGCAGCGAAT 
GCGGCTGAAA TTTATAATAA AGACGGCAAC AAATTAGACC TGTTTGGTAA AGTTGATGGC 
CTGCACTACT TCTCTGACGA CAAAGGCAGC GACGGCGACC AGACCTACAT GCGTATCGGC 
TTCAAAGGCG AAACGCAGGT TAACGATCAG CTGACCGGTT ATGGCCAGTG GGAATATCAG 
ATTCAGGGCA ACCAGACTGA AGGCAGCAAC GACTCCTGGA CGCGTGTGGC GTTTGCGGGT 
CTGAAATTCG CTGACGCAGG TTCCTTCGAT TATGGTCGTA ACTACGGCGT AACCTATGAT 
GTGACCTCCT GGACCGACGT TCTGCCGGAG TTTGGCGGCG ACACCTACGG CGCTGACAAC 
TTTATGCAGC AGCGTGGTAA CGGCTATGCT ACCTACCGTA ACACCGACTT CTTCGGCCTG 
GTGGATGGTC TGGACTTCGC GTTACAGTAT CAGGGCAAAA ACGGCAGCGT GAGCGGTGAA 
AACACCAACG GTCGCAGCCT GCTGAACCAG AACGGCGACG GTTACGGCGG ATCGCTGACT 
TATGCAATCG GCGAAGGCTT CTCTGTCGGT GGCGCTATCA CCACGTCTAA ACGTACTGCC 
GATCAGAACA ACACCGCTGA CGCTCGCCTG TATGGTAACG GTGATCGCGC TACGGTCTAC 
ACCGGCGGCC TGAAATACGA TGCGAACAAC ATCTATCTGG CAGCGCAGTA TTCTCAGACC 
TATAACGCAA CCCGTTTTGG TACCTCTAAC GGCAACAATA AGTCCGACTC TTACGGTTTT 
GCCAACAAAG CGCAGAACTT TGAAGTGGTT GCTCAGTACC AGTTCGACTT TGGTCTGCGT 
CCGTCTGTGG CTTACCTGCA GTCTAAAGGT AAGGACATCA GCAACGGCTA CGGCGCCAGC 
TATGGCGACC AGGACATCGT AAAATACGTT GATGTCGGCG CGACTTACTA CTTCAACAAA 
AACATGTCCA CCTATGTTGA TTACAAAATC AACCTGCTGG ATAAAAACGA CTTTACCCGC 
GATGCGGGCA TCAACACCGA CGACATCGTA GCGCTGGGTC TGGTTTACCA GTTCTAA
 
Protein sequence
MKVKVLSLLV PALLVAGAAN AAEIYNKDGN KLDLFGKVDG LHYFSDDKGS DGDQTYMRIG 
FKGETQVNDQ LTGYGQWEYQ IQGNQTEGSN DSWTRVAFAG LKFADAGSFD YGRNYGVTYD 
VTSWTDVLPE FGGDTYGADN FMQQRGNGYA TYRNTDFFGL VDGLDFALQY QGKNGSVSGE 
NTNGRSLLNQ NGDGYGGSLT YAIGEGFSVG GAITTSKRTA DQNNTADARL YGNGDRATVY 
TGGLKYDANN IYLAAQYSQT YNATRFGTSN GNNKSDSYGF ANKAQNFEVV AQYQFDFGLR 
PSVAYLQSKG KDISNGYGAS YGDQDIVKYV DVGATYYFNK NMSTYVDYKI NLLDKNDFTR 
DAGINTDDIV ALGLVYQF