| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2338 |
|---|
| Symbol | cpsB |
|---|
| ID | 6518740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2210044 |
|---|
| End bp | 2211480 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642747401 |
|---|
| Product | mannose-1-phosphate guanylyltransferase |
|---|
| Protein accession | YP_002115194 |
|---|
| Protein GI | 194736911 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase |
|---|
| TIGRFAM ID | [TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAGA CAAAACTTTA CCCGGTTGTG ATGGCCGGTG GCTCCGGTAG CCGATTGTGG
CCGCTTTCTC GCGTGCTTTA TCCAAAACAG TTTTTGTGCC TGAAAGGCGA TCTCACCATG
CTGCAAACCA CCATTTGCCG TCTGAACGGC GTGGAGTGCG AAAGCCCGGT GGTTATCTGC
AACGAACAGC ACCGTTTTAT CGTTGCCGAA CAGCTCCGCC AGCTCAATAA GCTGACGGAG
AACATTATTC TTGAGCCCGC CGGGCGCAAT ACCGCGCCGG CGATTGCGCT GGCGGCGCTG
GCAGCGACGC GCCAGCATAC GGACTGCGAT CCGCTGATGC TGGTACTGGC GGCGGATCAT
GCGATCGCCA ATGAAGAGGC CTTCCGCGAC GCGGTGCGCG GCGCCATGCC CTATGCTTAC
GCGGGCAAAC TGGTGACCTT CGGTATTGTG CCGGATCTGC CGGAAACCGG CTATGGCTAT
ATCCGGCGCG GTGATGTCGT GCCGGGCGCG ACGGATGCGG TGGCTTTTGA GGTGGCGCAG
TTCGTTGAGA AGCCGGGGCT GGAAACCGCC CAGGCCTACG TCGCCAGCGG CGATTACTAC
TGGAACAGCG GCATGTTTCT GTTCCGCGCC GGACGCTATC TGGAAGAGCT GAAAAAGTTC
CGCCCCGATA TTCTGGCCGC TTGTGAACAG GCGATGCGCG GCGTCGATCC GGATCTTGAC
TTCATTCGTG TGGATGAAGA GGCCTTCCTC GCCTGTCCGG AAGAGTCCAT TGACTACGCG
GTGATGGAGC GGACGGCGGA CGCGGTGGTG ATGCCAATGG ACGCGGGCTG GAGCGATGTC
GGCTCGTGGT CCTCGCTGTG GGAAATCAGC GCCCACACCC CGGAGGGAAA TGTCCACCAC
GGCGACGTCA TCAGCCATAA AACGGAAAAC AGCTACGTTT ACGCCGAATC CGGCCTGGTG
ACCACCGTCG GTGTGAAGGA TCTGGTGGTG GTGCAGACCA AAGACGCCGT GCTGATTGCC
GATCGCCACG CGGTGCAGGA CGTGAAAAAG GTGGTGGAGA AGATCAAGGC CGACGGACGC
CATGAGCACC ACATGCATCG CGAGGTTTAC CGTCCGTGGG GCAAATACGA CTCCATCGAC
GCGGGCGAGC GCTATCAGGT GAAGCGCATT ACCGTCAAGC CGGGGGAAGG ACTGTCGGTA
CAGATGCACC ATCACCGCGC CGAGCACTGG GTGGTGGTGG CAGGGACCGC CAGAGTCACC
ATCAACGGCG AGGTTAAGCT GCTCGGTGAA AACGAGTCCA TCTATATTCC GCTGGGGGCG
ACCCACTGCC TGGAAAATCC GGGAAAAATA CCGCTCGATT TAATTGAAGT GCGTTCCGGC
TCGTATCTCG AAGAGGACGA CGTGGTGCGG TTCGAGGACC GTTACGGGCG GGTCTGA
|
|---|
| Protein sequence | MRQTKLYPVV MAGGSGSRLW PLSRVLYPKQ FLCLKGDLTM LQTTICRLNG VECESPVVIC
NEQHRFIVAE QLRQLNKLTE NIILEPAGRN TAPAIALAAL AATRQHTDCD PLMLVLAADH
AIANEEAFRD AVRGAMPYAY AGKLVTFGIV PDLPETGYGY IRRGDVVPGA TDAVAFEVAQ
FVEKPGLETA QAYVASGDYY WNSGMFLFRA GRYLEELKKF RPDILAACEQ AMRGVDPDLD
FIRVDEEAFL ACPEESIDYA VMERTADAVV MPMDAGWSDV GSWSSLWEIS AHTPEGNVHH
GDVISHKTEN SYVYAESGLV TTVGVKDLVV VQTKDAVLIA DRHAVQDVKK VVEKIKADGR
HEHHMHREVY RPWGKYDSID AGERYQVKRI TVKPGEGLSV QMHHHRAEHW VVVAGTARVT
INGEVKLLGE NESIYIPLGA THCLENPGKI PLDLIEVRSG SYLEEDDVVR FEDRYGRV
|
|---|
| |