| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2327 |
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| Symbol | rfbC |
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| ID | 6515418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 2196661 |
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| End bp | 2197209 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642747390 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_002115183 |
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| Protein GI | 194734639 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0661523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGTGA TTAAAACAGC AATACCAGAT GTCTTGATCT TAGAGCCTAA AGTTTTTGGC
GATGAGAGGG GATTCTTTTT TGAAAGTTAT AACCAGCAGA CCTTTGAAGA GTCGATTGGA
CGTAAAGTTA CATTTGTTCA AGATAATCAT TCAAAATCCA AAAAGAACGT ACTCAGAGGG
TTGCATTTTC AGAGAGGAGA AAATGCACAG GGTAAGTTAG TTCGTTGTGC TGTCGGTGAG
GTTTTTGATG TTGCGGTCGA TATCCGAAAA GAATCGCCTA CTTTTGGTCA GTGGGTTGGC
GTAAATCTAT CTGCTGAGAA TAAGCGACAG CTTTGGATTC CAGAAGGTTT TGCTCATGGT
TTTGTTACTC TTAGTGAGTA TGCAGAGTTT CTGTACAAAG CAACTAATTA TTACTCACCT
TCATCGGAAG GTAGCATTCT ATGGAATGAT GAGACAATAG GTATTGAATG GCCTTTTTCT
CAGCTGCCTG AGCTTTCAGC AAAAGATGCT GCAGCACCTT TACTGCATCA AGCCTTGTTA
ACAGAGTAA
|
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| Protein sequence | MIVIKTAIPD VLILEPKVFG DERGFFFESY NQQTFEESIG RKVTFVQDNH SKSKKNVLRG
LHFQRGENAQ GKLVRCAVGE VFDVAVDIRK ESPTFGQWVG VNLSAENKRQ LWIPEGFAHG
FVTLSEYAEF LYKATNYYSP SSEGSILWND ETIGIEWPFS QLPELSAKDA AAPLLHQALL
TE
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