| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2112 |
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| Symbol | fliA |
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| ID | 6518158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 2022597 |
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| End bp | 2023316 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642747190 |
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| Product | flagellar biosynthesis sigma factor |
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| Protein accession | YP_002114988 |
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| Protein GI | 194736051 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.970254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0258062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTCAC TGTATACCGC TGAAGGTGTA ATGGATAAAC ACTCGCTGTG GCAGCGTTAT
GTACCGCTGG TGCGTCACGA AGCATTGCGC CTGCAGGTGC GATTGCCGGC GAGCGTGGAA
CTGGACGATC TGCTACAAGC GGGCGGCATC GGGTTATTAA ATGCGGTCGA CCGATATGAC
GCTTTGCAAG GAACGGCATT TACCACTTAC GCAGTGCAGC GTATTCGTGG GGCGATGCTG
GATGAATTAC GCAGCCGCGA TTGGGTGCCG CGTAGCGTCC GGCGTAATGC CCGCGAAGTG
GCGCAGGCGA TGGGACAACT GGAGCAGGAA CTGGGGCGTA ATGCGACGGA AACCGAAGTG
GCGGAACGTC TTGGCATCCC TGTTGCGGAG TATCGTCAGA TGTTGCTCGA TACCAACAAC
AGCCAACTTT TCTCTTACGA TGAGTGGCGG GAAGAGCATG GCGATAGCAT CGAACTGGTG
ACTGAAGAAC ATCAACAGGA AAACCCGTTA CATCAACTGC TGGAGGGCGA CCTGCGACAG
CGGGTAATGG ATGCGATTGA ATCGCTGCCG GAACGCGAGC AACTGGTGTT AACGCTGTAT
TACCAGGAAG AGCTCAATCT CAAAGAGATT GGCGCGGTAC TGGAAGTCGG CGAATCGCGG
GTCAGCCAGT TGCATAGTCA GGCCATCAAA CGATTACGCA CCAAACTGGG TAAGTTATAG
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| Protein sequence | MNSLYTAEGV MDKHSLWQRY VPLVRHEALR LQVRLPASVE LDDLLQAGGI GLLNAVDRYD
ALQGTAFTTY AVQRIRGAML DELRSRDWVP RSVRRNAREV AQAMGQLEQE LGRNATETEV
AERLGIPVAE YRQMLLDTNN SQLFSYDEWR EEHGDSIELV TEEHQQENPL HQLLEGDLRQ
RVMDAIESLP EREQLVLTLY YQEELNLKEI GAVLEVGESR VSQLHSQAIK RLRTKLGKL
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