Gene SeSA_A1987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1987 
Symbol 
ID6518931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1918072 
End bp1918953 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content53% 
IMG OID642747075 
Productheat shock protein HtpX 
Protein accessionYP_002114876 
Protein GI194736642 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGAA TCGCGCTCTT CCTGCTGACG AACCTGGCCG TGATGGTCGT TTTCGGGCTG 
GTTCTGAGCC TGACAGGGAT ACAGTCGAGC AGCGTGCAAG GCTTGCTGAT CATGGCGCTG
CTGTTTGGTT TTGGCGGTTC TTTTATTTCA TTGCTGATGT CCAAATGGAT GGCGTTAAAA
TCCGTAGGAG GGGAAGTTAT TGAACAGCCT CGCAATGAAA GAGAACGCTG GTTGATGAAC
ACCGTAGCAA CGCAAGCGCG CCAGGCCGGT ATCGCCATGC CGCAGGTTGC TATCTACCAT
GCGCCGGACA TTAACGCGTT TGCGACGGGC GCACGCCGTG ACGCCTCATT GGTCGCTGTG
AGCACCGGTT TGTTGCAAAA CATGAGCCCT GACGAAGCGG AAGCCGTCAT TGCGCATGAA
ATCAGCCATA TTGCCAATGG CGATATGGTG ACGATGACGT TGATTCAGGG GGTGGTTAAC
ACCTTCGTTA TCTTTATTTC GCGCATTATC GCGCAAATTG CCGCTGGTTT TCTGGGCGGC
AACCGTGATG AAGGCGAAGG AAGTAACGGT AATCCGCTAA TCTATTTCGC CGTTGCGACG
GTGCTGGAAC TGGTCTTCGG TATTCTGGCG AGCATCATCA CCATGTGGTT CTCCCGTTAC
CGTGAGTTTC ATGCCGATGC GGGATCGGCG AAGCTGGTTG GCCGTGAAAA AATGATTGCC
GCGTTGCAGC GCCTGAAAAC CAGCTACGAG CCGCAAGAAG CGACCAGCAT GATGGCGTTT
TGTATTAACG GTAAATCGAA ATCGTTAAGC GAGCTGTTTA TGACGCACCC ACCGCTTGAT
AAACGCATTG AAGCGCTGCG TAGCGGCGAG TACCTGAAAT AA
 
Protein sequence
MMRIALFLLT NLAVMVVFGL VLSLTGIQSS SVQGLLIMAL LFGFGGSFIS LLMSKWMALK 
SVGGEVIEQP RNERERWLMN TVATQARQAG IAMPQVAIYH APDINAFATG ARRDASLVAV
STGLLQNMSP DEAEAVIAHE ISHIANGDMV TMTLIQGVVN TFVIFISRII AQIAAGFLGG
NRDEGEGSNG NPLIYFAVAT VLELVFGILA SIITMWFSRY REFHADAGSA KLVGREKMIA
ALQRLKTSYE PQEATSMMAF CINGKSKSLS ELFMTHPPLD KRIEALRSGE YLK