| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1943 |
|---|
| Symbol | |
|---|
| ID | 6515908 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | + |
|---|
| Start bp | 1877816 |
|---|
| End bp | 1879549 |
|---|
| Gene Length | 1734 bp |
|---|
| Protein Length | 577 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642747034 |
|---|
| Product | potassium/proton antiporter |
|---|
| Protein accession | YP_002114835 |
|---|
| Protein GI | 194735060 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00285963 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATGCTG CAACAATTAT TAGTCTATTT ATTTTAGGTT CCATCCTTGT AACCAGCAGT
ATCCTGTTAA GTTCATTCTC ATCGCGACTG GGCATCCCGA TTCTGGTCAT TTTCCTCGCC
ATTGGGATGT TAGCGGGTGT GGATGGCATT GGCGGTATTC CTTTCGATAA TTATCCTTTC
GCTTATATGG TCAGTAACCT GGCGCTGGCG ATTATTTTAC TCGATGGCGG CATGCGCACC
CAGGCCAGCT CTTTCCGGGT AGCGCTGGGC CCCGCGCTGT CGCTGGCGAC GCTCGGCGTA
CTGATCACGT CGGGGTTAAC AGGTATGATG GCCGCCTGGC TGTTTCATCT GGATCTTATT
GAAGGTCTGC TCATTGGCGC GATAGTCGGT TCCACTGACG CCGCAGCGGT CTTTTCTCTG
CTTGGCGGCA AAGGGCTAAA CGAACGTGTA GGCTCCACGC TGGAGATCGA ATCGGGAAGT
AACGACCCGA TGGCCGTTTT TCTGACCATT ACATTAATTG AGATGATCCA GAAACATGAA
ACCGGTCTGG ACTGGATGTT TGCCGTCCAT ATTATCCAGC AGTTCGGTCT CGGTATTGTT
TTTGGTCTCG GCGGCGGTTA CCTGCTACAG CAGATGATCA ACCGCATTTC TCTGCCCAGC
GGCCTGTATC CGATGTTGGC GCTCAGCGGC GGTATTCTGA TTTTTGCTTT GACGACCGCG
CTTGAAGGCA GCGGTATTCT CGCGGTCTAT CTGTGCGGAT TCCTGTTAGG AAACCGCCCG
ATTCGCAACC GTTACGGCAT CCTGCAAAAC TTTGACGGAC TGGCCTGGCT GGCGCAGATC
GCGATGTTCC TGGTCCTGGG GCTGTTGGTG ACGCCTTCCG ATCTGTGGCC GATTGCCGTC
CCTGCGCTCA TTCTCTCTAT CTGGATGATT TTCTTCGCCC GCCCACTGTC GGTGTTTACC
GGCCTGCTGC CATTTCGCGG CTTTAATCTT CGGGAGCGCA TTTTCATCAG TTGGGTCGGA
CTGCGCGGCG CGGTGCCGAT TATTCTCGCC GTTTTCCCGA TGATGGCCGG GCTTGAAAAC
GCTCGCCTGT TCTTTAATGT CGCTTTCTTT GTGGTACTGG TGTCACTGCT CCTGCAGGGA
ACATCGCTGT CATGGGCGGC GAAAAGAGCC AAAGTGGTCG TGCCTCCGGT TGGCTGGCCA
GTATCGCGCG TGGGGCTTGA CATCCATCCT GATAATCCGT GGGAGCAATT CATCTATCAG
TTGAGCGCCG ACAAATGGTG CGTCGGCGCG GCGTTGCGCG ACCTGCATAT GCCGAACGAA
ACCCGCATTG CCGCGCTATT TCGCAATAAT GAACTGTTTC ACCCCACGGG CAGTACTCGC
CTGCAGGAAG GCGACGTACT CTGCGTGATT GGCCGGGAGC GCGATCTGCC AGCGCTAGGC
AAATTGTTTA GCCAGTCGCC GCCGGTTTCG TTAGATCAGC GTTTCTTTGG CGATTTTATC
CTCGAAGCGA ATGCGAAATT CGCCGACGTG GCGCTTATCT ACGGGCTGGA AGAAGGAACG
GAATACCGGG ATAAACAACA AACCCTCGGT GAAATCATAC AGCAACTGCT GGGCGCTGCG
CCGGTCGTCG GCGATCAGGT GGAGTTTGGC GGCATGATTT GGACGGTAGC TGAAAAAGAA
GATAACGTGG TACGCAAGAT TGGGGTACGC GTCGCCGAAG ACGAAGCAGA ATAA
|
|---|
| Protein sequence | MDAATIISLF ILGSILVTSS ILLSSFSSRL GIPILVIFLA IGMLAGVDGI GGIPFDNYPF
AYMVSNLALA IILLDGGMRT QASSFRVALG PALSLATLGV LITSGLTGMM AAWLFHLDLI
EGLLIGAIVG STDAAAVFSL LGGKGLNERV GSTLEIESGS NDPMAVFLTI TLIEMIQKHE
TGLDWMFAVH IIQQFGLGIV FGLGGGYLLQ QMINRISLPS GLYPMLALSG GILIFALTTA
LEGSGILAVY LCGFLLGNRP IRNRYGILQN FDGLAWLAQI AMFLVLGLLV TPSDLWPIAV
PALILSIWMI FFARPLSVFT GLLPFRGFNL RERIFISWVG LRGAVPIILA VFPMMAGLEN
ARLFFNVAFF VVLVSLLLQG TSLSWAAKRA KVVVPPVGWP VSRVGLDIHP DNPWEQFIYQ
LSADKWCVGA ALRDLHMPNE TRIAALFRNN ELFHPTGSTR LQEGDVLCVI GRERDLPALG
KLFSQSPPVS LDQRFFGDFI LEANAKFADV ALIYGLEEGT EYRDKQQTLG EIIQQLLGAA
PVVGDQVEFG GMIWTVAEKE DNVVRKIGVR VAEDEAE
|
|---|
| |