Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1920 |
Symbol | ychM |
ID | 6517305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1854858 |
End bp | 1856543 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642747012 |
Product | putative sulfate transporter YchM |
Protein accession | YP_002114813 |
Protein GI | 194734827 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0235525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACAAAT TATTTTCCTC ACATGTGATG CCTTTCCGCG CTCTCATCGA TGCTTGCTGG AAAGAAAAAT ATACCGCCTC CCGGTTCACC CGTGATGTGA TAGCCGGGAT CACCGTCGGG ATTATTGCTA TCCCGCTGGC GATGGCGCTG GCAATTGGCA GTGGCGTTGC GCCGCAATAT GGCCTCTATA CCTCCGCTGT CGCCGGGATC GTGATCGCGC TAACCGGCGG CTCGCGCTTT AGCGTTTCCG GCCCTACCGC CGCGTTTGTG GTGATTTTGT ATCCGGTATC GCAACAGTTT GGTCTGGCGG GCCTACTGGT CGCCACGCTG ACGTCGGGCT TCTTCCTGAT CCTTTTCGGC CTGGCGAGAC TGGGGCGATT GATTGAATAT ATCCCGGTGT CGGTCACGTT GGGTTTTACC TCAGGGATTG GTATTACCAT CGGTACCATG CAGATTAAAG ATTTTCTTGG TCTGCAGATG GCCCATGTGC CAGAGCACTA TTTGCAGAAA GTCGGCGCGC TGTTTATGGC GTTGCCCACC GTCAATATTG GCGATGCCGC CATTGGCGTG GTAACGCTGG GAACGTTGAT TTTCTGGCCG CGTCTCGGTA TTCGTCTGCC AGGACATCTT CCCGCGCTGC TGGCCGGTTG CGCCGTAATG GGGATTGTTA ATCTGCTGGG CGGCAATGTG GCGACTATCG GCTCACAGTT CCATTACGTT CTGGCTGACG GCACTCAGGG CAACGGCATC CCGCAGCTCC TGCCGCAACT GATGCTGCCG TGGAGTCTTC CAGGCTCCGA TTTCACGCTA AGCTGGGATT CACTGCGCGC GCTGCTGCCA GCGGCTTTCT CAATGGCAAT GCTGGGGGCA ATCGAATCAT TGCTCTGCGC CGTCGTGCTG GACGGCATGA CCGGCACCAA ACATAAAGCT AACAGCGAAC TTATCGGCCA GGGGCTGGGG AATATGGTCG CGCCGTTCTT TGGCGGCATC ACCGCCACCG CCGCGATTGC CCGCTCTGCC GCCAACGTTC GCGCTGGCGC GACCTCTCCC GTCTCGGCGG TAATTCACGC TATCCTGGTC ATTCTGGCGC TACTGGTCTT AGCCCCGCTA CTCTCTTGGC TGCCGCTTTC CGCGATGGCG GCGCTACTGC TGATGGTGGC ATGGAATATG AGTGAAGCCC ATAAAGTGGT GGATCTGTTA CGCCATGCGC CGAAAGACGA CATCATCGTT ATGCTGCTGT GCATGTCATT AACGGTTCTG TTTGATATGG TCATCGCCAT CAGCGTGGGG ATTGTTCTTG CTTCCCTGCT GTTTATGCGC CGTATTGCGC GAATGACTCG ACTTGCGCCG GTCAATGTCG ATGTGCCTGA TGATGTGCTG GTGCTGCGTG TTATCGGTCC GCTCTTTTTC GCCGCGGCGG AAGGGCTGTT TACCGACCTT GAGTCACGTA TTAAGGGCAA ACGTATCGTC GTTCTGAAAT GGGACGCAGT ACCAGTGCTG GATGCAGGCG GGCTTGATGC TTTTCAGCGT TTTGTGAAGC GTCTGCCGGA GGGTTGCGAA TTGCGTATCA GTAACCTGGA GTTCCAACCG CTGCGCACAA TGGCGCGTGC CGGTATCAAA CCTATTCCTG GGCGTCTGAC CTTCTTCCCG AACAGGACGG AGGCGTTAGC GGATTTACTC AGTTAA
|
Protein sequence | MNKLFSSHVM PFRALIDACW KEKYTASRFT RDVIAGITVG IIAIPLAMAL AIGSGVAPQY GLYTSAVAGI VIALTGGSRF SVSGPTAAFV VILYPVSQQF GLAGLLVATL TSGFFLILFG LARLGRLIEY IPVSVTLGFT SGIGITIGTM QIKDFLGLQM AHVPEHYLQK VGALFMALPT VNIGDAAIGV VTLGTLIFWP RLGIRLPGHL PALLAGCAVM GIVNLLGGNV ATIGSQFHYV LADGTQGNGI PQLLPQLMLP WSLPGSDFTL SWDSLRALLP AAFSMAMLGA IESLLCAVVL DGMTGTKHKA NSELIGQGLG NMVAPFFGGI TATAAIARSA ANVRAGATSP VSAVIHAILV ILALLVLAPL LSWLPLSAMA ALLLMVAWNM SEAHKVVDLL RHAPKDDIIV MLLCMSLTVL FDMVIAISVG IVLASLLFMR RIARMTRLAP VNVDVPDDVL VLRVIGPLFF AAAEGLFTDL ESRIKGKRIV VLKWDAVPVL DAGGLDAFQR FVKRLPEGCE LRISNLEFQP LRTMARAGIK PIPGRLTFFP NRTEALADLL S
|
| |