Gene SeSA_A1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1917 
Symbolipk 
ID6518269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1852672 
End bp1853520 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content55% 
IMG OID642747009 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002114810 
Protein GI194736140 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.012277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATT GGCCTTCTCC GGCAAAATTA AATCTGTTTT TATATATCAC CGGACAGCGA 
GCAGACGGCT ACCACACGCT GCAGACGCTG TTTCAGTTTC TGGATTATGG CGACACACTC
CACATCGAAC CGCGTCACGA TGGCGAAATC CATTTATTAA CGCCGGTTAC CGGCGTTGAA
AATGAAGACA ATCTGATCGT CCGCGCCGCG CGGCTGTTGA TGAAAGCCGC CTCGGAGAGT
GGACGCCTGC CCGTCGGAAG CGGTGCGGAT ATCAGCATTG AGAAGCGCCT TCCCATGGGC
GGCGGTCTGG GCGGCGGCTC GTCTAACGCC GCGACCGTTC TGGTGGCGCT CAATCATCTT
TGGCAATGCG GGCTTTCCAT TGATGAACTG GCGACGCTCG GCCTGACGCT CGGCGCCGAC
GTCCCGGTCT TTGTTCGTGG CCACGCCGCG TTTGCCGAAG GCGTAGGCGA AATATTAACG
CCGGTGAATC CGCCGGAAAA ATGGTATCTG GTCGCGCACC CTGGCGTAAG CATTCCGACG
CCGGTTATCT TTAAAGATCC TCAATTGCCG CGTAATACGC CAAAAAGGTC AATAGATACG
TTACTAAAAT GTGAATTCAG CAATGATTGC GAGGTTATCG CAAGAAAACG TTTTCGCGAG
GTTGATGCGG CGCTTTCCTG GCTGTTAGAA TACGCGCCGT CGCGCCTGAC TGGGACAGGG
GCCTGTGTCT TTGCTGAATT CGATACAGAG TCTTGTGCTC GCCAGGTGCT TGAGCAAGCC
CCGGAATGGC TCAATGCTTT TGTGGCGAAG GGTGTCAACC TCTCCCCATT GCATCGAGAG
TTACTCTAA
 
Protein sequence
MTHWPSPAKL NLFLYITGQR ADGYHTLQTL FQFLDYGDTL HIEPRHDGEI HLLTPVTGVE 
NEDNLIVRAA RLLMKAASES GRLPVGSGAD ISIEKRLPMG GGLGGGSSNA ATVLVALNHL
WQCGLSIDEL ATLGLTLGAD VPVFVRGHAA FAEGVGEILT PVNPPEKWYL VAHPGVSIPT
PVIFKDPQLP RNTPKRSIDT LLKCEFSNDC EVIARKRFRE VDAALSWLLE YAPSRLTGTG
ACVFAEFDTE SCARQVLEQA PEWLNAFVAK GVNLSPLHRE LL