Gene SeSA_A1837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1837 
Symbol 
ID6517377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1778901 
End bp1780070 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content51% 
IMG OID642746934 
Producttetratricopeptide repeat protein 
Protein accessionYP_002114737 
Protein GI194737248 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.2719e-06 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000343343 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGGAGT TGTTATTTCT GCTGTTGCCT GTAGCCGCTG CCTATGGGTG GTATATGGGT 
CGCAGAAGTG CGCAACAAAC AAAACAGGAT GAAGCTAACC GCCTGTCGCG CGATTATGTC
GCAGGGGTTA ACTTCCTGCT GAGTAACCAA CAAGATAAAG CGGTGGATCT GTTCCTCGAT
ATGCTTAAAG AGGATACCGG CACCGTTGAG GCTCATCTCA CTCTCGGTAA TCTGTTTCGC
TCACGAGGCG AAGTCGATCG CGCCATTCGT ATTCATCAAA CGCTCATGGA AAGCGCTTCA
TTGACCTATG AACAGCGTTT ACTGGCTGTT CAGCAACTGG GGCGCGACTA TATGGCCGCC
GGTTTATATG ACCGCGCGGA AGATATGTTT AACCAACTTA CCGACGAAAC GGAATTTCGC
GTAGGCGCGT TACAGCAGCT CTTGCAAATC TATCAGCTAA CCAGCGACTG GCAAAAGGCG
ATCGAAGTAG CAGAACGGCT GGTGAAACTG GGCAAAGATA AACAGCGTAT CGAAATCGCC
CATTTTTACT GTGAGTTAGC GTTACAGCAG ATGGGCAACG ACGATATGGA TCGCGCGATG
GCGTTGCTGA AAAAAGGTGC CGCCGCAGAT AAAAATAGCG CCCGGGTGTC TATCATGATG
GGTCGCGTTT ATATGGCGAG AGGGGATTAC GCCAAAGCGG TCGAAAGCCT GCAACGTGTG
ATCGTTCAGG ATAAAGAGCT GGTCAGCGAA ACGCTGGAGA TGCTGCAAAC CTGTTATCAA
CAGCTCGGTA AAAATGCCGA GTGGGCGGAG TTTTTACGTC GCGCCGTTGA GGAGAATACC
GGTGCTGGCG CTGAGTTAAT GCTTGCCGAT ATTCTGGAAG CGCGTGAAGG TAGTGACGCA
GCTCAAGTCT ATATCACGCG TCAGCTACAG CGACATCCTA CCATGCGGGT GTTCCATAAG
CTGATGGATT ACCATCTCAA TGAGGCGGAA GAAGGGCGAG CGAAAGAAAG CCTGATGGTA
CTGCGTGATA TGGTTGGCGA GCAGGTGCGC AGTAAACCGC GGTATCGTTG TCAGAAATGC
GGTTTTACCG CCTATACCTT GTACTGGCAC TGTCCGTCCT GCCGGGCATG GTCGACCATT
AAACCTATTC GCGGACTTGA TGGGCAGTAG
 
Protein sequence
MLELLFLLLP VAAAYGWYMG RRSAQQTKQD EANRLSRDYV AGVNFLLSNQ QDKAVDLFLD 
MLKEDTGTVE AHLTLGNLFR SRGEVDRAIR IHQTLMESAS LTYEQRLLAV QQLGRDYMAA
GLYDRAEDMF NQLTDETEFR VGALQQLLQI YQLTSDWQKA IEVAERLVKL GKDKQRIEIA
HFYCELALQQ MGNDDMDRAM ALLKKGAAAD KNSARVSIMM GRVYMARGDY AKAVESLQRV
IVQDKELVSE TLEMLQTCYQ QLGKNAEWAE FLRRAVEENT GAGAELMLAD ILEAREGSDA
AQVYITRQLQ RHPTMRVFHK LMDYHLNEAE EGRAKESLMV LRDMVGEQVR SKPRYRCQKC
GFTAYTLYWH CPSCRAWSTI KPIRGLDGQ