Gene SeSA_A1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1836 
SymbolpyrF 
ID6517974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1777973 
End bp1778770 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content57% 
IMG OID642746933 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_002114736 
Protein GI194735972 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000112011 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000315071 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGCCG TTTATCCAAT TTGCGCCACT TCCGGTGCCC ATCATCAAGA AGGTCTGGTC 
ATGACGTTTA CTGCTTCATC TTCTTCCTGC GCTATTACTG AATCGCCTGT CGTTGTGGCG
TTGGATTACC ATGAACGCGA TAAAGCCCTG GCGTTTGTCG ATAAAATCGA TCCTCGCGAT
TGTCGCTTAA AAGTGGGCAA AGAGATGTTC ACGTTATTTG GCCCACAGCT CGTCCGGGAT
CTCCAGCAAC GTGGGTTTGA TGTCTTTCTT GATCTAAAAT TTCATGATAT TCCCAACACC
ACGGCCCGGG CAGTCGCCGC AGCGGCAGAC CTGGGCGTCT GGATGGTAAA CGTTCACGCG
TCTGGCGGGG CGAGAATGAT GGCCGCAGCG CGCGACGCGC TGGCGCCATT CGGTAAAGAT
GCGCCGTTGC TCATTGCCGT GACCGTGTTG ACCAGTATGG AAACCAGCGA TCTGCGCGAT
CTGGGCGTGA TGTTGTCACC GGCGGAACAT GCGGAGCGGC TGGCGCGCCT GACGCAGCAA
TGCGGGCTGG ATGGCGTGGT CTGTTCCGCT CAGGAAGCGG TCAGATTTAA ACAGGTCTTT
GGCGCTGCAT TTAAGCTGGT GACGCCGGGC ATTCGGCCCG CAGGCAGCGA GGCAGGCGAT
CAGCGACGCA TTATGACGCC CGAACAGGCA TTATCCGCCG GCGTCGACTA TATGGTGATT
GGCCGCCCGG TTACGCAATC GGTAGATCCG GCGCAAACGC TGAAGGATAT TAACGCGTCA
CTGAAACGGG AGGCATAA
 
Protein sequence
MHAVYPICAT SGAHHQEGLV MTFTASSSSC AITESPVVVA LDYHERDKAL AFVDKIDPRD 
CRLKVGKEMF TLFGPQLVRD LQQRGFDVFL DLKFHDIPNT TARAVAAAAD LGVWMVNVHA
SGGARMMAAA RDALAPFGKD APLLIAVTVL TSMETSDLRD LGVMLSPAEH AERLARLTQQ
CGLDGVVCSA QEAVRFKQVF GAAFKLVTPG IRPAGSEAGD QRRIMTPEQA LSAGVDYMVI
GRPVTQSVDP AQTLKDINAS LKREA