Gene SeSA_A1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1722 
Symbol 
ID6517180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1666398 
End bp1666955 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content53% 
IMG OID642746826 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002114629 
Protein GI194735253 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.185673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTTAC TGGGGGGAAA AATGGATAAC CTGACACACT ATCTGGCGAC CACGTTAAGA 
ACGTTACGCC ATCAGCGAGG CTGGAGTTTA TCGCGTCTGG CGGAGATCTC CGGCGTCTCA 
AAAGCCATGT TAGGGCAGAT AGAGCGTAAT GAATCCAGCC CGACAGTCGC AACGCTGTGG 
AAAATTGCGA CGGGCCTGAA CGTTCCATTC TCAATGTTTA TTTCGCCTCC GCAGGCCGAA 
TTTCCGCCAA CCTTCGATCC CCAGCAGCAA GCGATGGTAA TCACACCGCT GTTTCCGTGG 
GACCCTGAAC TCTGTTTTGA CTATTTTTCT CTATTGCTGG CGCCTGGCGC GGTCAGCGAA 
TCAGCGCCGC ATAAAGCCGG CGTTATCGAA CATGTGGTGG TGATTCAGGG TCGGCTGGAC 
ATGTGTACTG GTGGGGTATG GCAAACCATA GACGCCGGTA AAGGTTTGCG TTTTGCCGGC 
GATACGGCGC ATACCTATCG CAACAGCAGT GACCAGACGG TTCATTTTCA CTCGCTGATC 
CATTACCCGC GTGATTAA
 
Protein sequence
MVLLGGKMDN LTHYLATTLR TLRHQRGWSL SRLAEISGVS KAMLGQIERN ESSPTVATLW 
KIATGLNVPF SMFISPPQAE FPPTFDPQQQ AMVITPLFPW DPELCFDYFS LLLAPGAVSE 
SAPHKAGVIE HVVVIQGRLD MCTGGVWQTI DAGKGLRFAG DTAHTYRNSS DQTVHFHSLI 
HYPRD