Gene SeSA_A1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1668 
SymbolnhaC 
ID6515810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1601826 
End bp1603277 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content52% 
IMG OID642746776 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_002114579 
Protein GI194737574 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID[TIGR00931] Na+/H+ antiporter NhaC 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAT CACAAAACAA GAAGAAAACG CTGTCATTGG GTTTAGCGCT AATCCCAGTC 
ATCTCCATGT TGTTATTGTT GATTATCGGT TACGGCATCA TGGGGCTACG TATCGAACCG 
CTCCTTCTGT GCTCTGCGGC GGTAGCGGCA GGCATTGCAT GGTGGCAAGG ATACTGTTGG 
GAAGACATCA TCAACTCAGT GGTGGATAAG CTGGCTAAAG CAATGCCGGT TATCATGATC 
CTGATCTGCG TGGGCGGTTT GATTGGCACC TGGATGTTTA GTGGCACCAT TCCCTACATG 
GTGTACTGGG GGCTAAAACT CATAAGCCCG GAATATATTT TGATTGCAGC CTTCTTTTTA 
ACCAGCGTGG TCTCCGTCTG TACCGGTACA TCGTGGGGAT CCGCCGGGAC GGTTGGCGTT 
GCGTTAATGG GGGTTGCCGC CGGGCTGGAC GTGTCTCTTG CAGCAGCAGC TGGCGCCGTC 
GTTTCTGGCG CTTATTTCGG CGACAAAATC TCACCGTTGT CCGACTCGAC TAACTTTGCC 
GCGATTGTCG CAGACACTAC TCTGTTTGAG CATATTCAGC ATTTACTTTG GACGACCCTG 
CCAAGTTTCC TGCTTGCCGC CGTGGTTTAT CTTATCGCCG GACACAGTAA TATGCTGGGC 
GAGGTGGCCA CGCCGCAGCG CGTTACGGAC ATCATCCACT CGCTGGAGTC GCTATACCAT 
TTTAATATTG TTCTTATTTT GCCGCCGGTG ATCGTACTGT GGGGCGCAAT TCGCAAGAAG 
CCTGTCATCC CATTAATGTT AAGCGCCTGC GTACTTGCCT TATTCCTCGG CGTCATCATG 
CAGGGACTGA GCATCAAACA GGGACTGGAC GCTTTCATTG ATGGATTTGA TATCGCCATG 
TTCCCACAAG GCGCTGAAGG TGTCGTGGCC GATGTTCCGC GCCTGCTAAA CCGGGGCGGA 
ATGTTCTCGA TGATGGGAAC AATACTGTTA GTTTTCTGCG CTTTTTCATT TGCCGGAGCG 
CTAACGTTAA CCGGCGCGTT AACGATCATC ATTAACCGGC TGCTGACTAT TATTCATAGC 
GTTGGTCAGC TCATTGCCGC CACTATCGGC ACCACAATTT TGGTCACAGG AGCGACCAGC 
GACGGTAAAC TGGCATTGTT AGTTCCCGCC GAACTGTTTA AAGATGCCTA TCGTCGTATG 
GGGCTGGATA CTAAAAACCT TTCACGGACG ATAGAAGATG CCGGTACCGT TATCGAACCT 
CTCCTGCCGT GGACCTCGGC TGGTGTCTAC ATGGCGACCA CGCTGGGCGT TAGCACGCTT 
GATCTTCTGC CCTGGGCTAT CCAGTGCTAT GCGGCGATCT TCTTCGCATT AATTTATGGT 
TTTAGCGGAA TTGGTATTGC CAGAACTGCC TCCGCTTCAG AAAAGTCGCC GCAAGCGTCA 
GTGACGAAAT AA
 
Protein sequence
MSASQNKKKT LSLGLALIPV ISMLLLLIIG YGIMGLRIEP LLLCSAAVAA GIAWWQGYCW 
EDIINSVVDK LAKAMPVIMI LICVGGLIGT WMFSGTIPYM VYWGLKLISP EYILIAAFFL 
TSVVSVCTGT SWGSAGTVGV ALMGVAAGLD VSLAAAAGAV VSGAYFGDKI SPLSDSTNFA 
AIVADTTLFE HIQHLLWTTL PSFLLAAVVY LIAGHSNMLG EVATPQRVTD IIHSLESLYH 
FNIVLILPPV IVLWGAIRKK PVIPLMLSAC VLALFLGVIM QGLSIKQGLD AFIDGFDIAM 
FPQGAEGVVA DVPRLLNRGG MFSMMGTILL VFCAFSFAGA LTLTGALTII INRLLTIIHS 
VGQLIAATIG TTILVTGATS DGKLALLVPA ELFKDAYRRM GLDTKNLSRT IEDAGTVIEP 
LLPWTSAGVY MATTLGVSTL DLLPWAIQCY AAIFFALIYG FSGIGIARTA SASEKSPQAS 
VTK