Gene SeSA_A1645 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1645 
Symbol 
ID6519143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1584038 
End bp1584709 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID642746755 
Productputative regulatory protein 
Protein accessionYP_002114558 
Protein GI194736884 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTATAC CTGAGGTCAG GCAGGAGAGG CTCTATCAGA AGATAGCCAA CCTCATCATT 
AAGCTGATCA ATGATAATAT TTTTCCCCCG GGAACTTTTT TACCGCCAGA ACGCGAACTG 
GCAAAACAGC TTGGCGTGAG CCGCGCCTCC TTGCGAGAAG CCCTTATTGT ACTGGAGATC 
TCCGGATGGA TCGTGATTCA GTCCGGTAAT GGGGTTATCG TTTCAGATAA AAAACACCTT 
GCCAGCGACT ATACCATCGA AGAAATTCTC TCTACTCGCG AGCTGGTCGA TAGCCATTGT 
GCGCGCTTAG CCGCACAAAA CGATAACGTT GACGTCATCA ACCAAATAGA GGCGATTTAT 
CATCGTATGG ATCAAGCCAT TAACGATAAT AACGTCCACG GCTTTTACTC GCTGGATAAA 
GAATTTCACC TTGCGATCTC TGAGGCCAGC CGTAACCGGG TGTTGTTCGA TATGTCCCGT 
ATGTTATGGG AACAACGGAT TAATATCCCT TATGCCGGGC TTGATGAGCA GTCTGGAGAC 
AGAAATGTTT TACTTAATCT CAACAAACAA CATAAAGCGA TAGTGGATGC GATGCGCCAG 
TCTGATGCTG ACAGCGCCTA TGAGGGATCT CTGGAACATT TACGCTATGT GAGAAAGATT 
GTCGGCGGCT AA
 
Protein sequence
MVIPEVRQER LYQKIANLII KLINDNIFPP GTFLPPEREL AKQLGVSRAS LREALIVLEI 
SGWIVIQSGN GVIVSDKKHL ASDYTIEEIL STRELVDSHC ARLAAQNDNV DVINQIEAIY 
HRMDQAINDN NVHGFYSLDK EFHLAISEAS RNRVLFDMSR MLWEQRINIP YAGLDEQSGD 
RNVLLNLNKQ HKAIVDAMRQ SDADSAYEGS LEHLRYVRKI VGG