Gene SeSA_A1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1568 
SymbolfumC 
ID6516691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1511452 
End bp1512855 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content56% 
IMG OID642746680 
Productfumarate hydratase 
Protein accessionYP_002114483 
Protein GI194734009 
COG category[C] Energy production and conversion 
COG ID[COG0114] Fumarase 
TIGRFAM ID[TIGR00979] fumarate hydratase, class II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.366448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0865298 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACGG TACGCCGCGA GAAAGATTCA ATGGGCGCGA TTGAAGTCCC GGCAGATAAA 
CTGTGGGGGG CGCAGACTCA ACGTTCGCTG GAGCATTTTC GGATTTCCAC GGAGAAAATG
CCCGTCTCGC TCATTCATGC TCTGGCGTTG ACCAAGCGCG CCGCTGCGAA GGTCAACCAG
GACTTAGGGT TGTTGGCGGC GGAAAAAGCC AGCGCGATTA TCCAGGCGGC TGATGAAGTG
CTGGCGGGAA AACATGCTGA TGAGTTTCCG CTGGCGATTT GGCAGACCGG GTCCGGTACG
CAAAGCAACA TGAATATGAA TGAAGTGTTA GCGAACCGCG CCAGTGAAAT TTTGGGCGGC
GTTCGCGGTA TGGAACGCAA GGTGCATCCC AATGATGACG TCAATAAGAG TCAAAGCTCA
AACGATGTGT TCCCAACCGC CATGCACGTG GCGGCGTTAC TGGCGTTGCG CGAACACCTT
ATCCCGCAAT TATCCGCATT AACGGATACG CTTCGCGATA AATCCCACGC TTTCGCCGAT
ATTGTCAAAA TTGGCCGTAC TCACCTGCAG GACGCGACGC CGCTCACCTT AGGCCAGGAG
ATTTCCGGTT GGGTAGCCAT GCTGGAACAT AACCTCAGAC ACATTGAGCA CAGTTTACCG
CACGTCGCGG AACTGGCGCT CGGCGGAACC GCAGTAGGGA CAGGGCTTAA TACCCACCCG
GAATATGCCC GGCGCGTGGC CGAGGAACTG GCGACGATTA CCGCGGCGCC GTTTGTTACC
GCCCCGAATA AATTCGAAGC GCTGGCGACC TGTGACGCGT TGGTACAGGC GCATGGCGCA
TTAAAAGGGC TGGCGGCCTC GCTGATGAAA ATCGCCAACG ATGTTCGCTG GCTGGCATCC
GGCCCGCGCT GCGGCATTGG CGAGATTGCT ATCCCTGAGA ATGAGCCGGG CAGTTCCATT
ATGCCTGGTA AAGTGAACCC GACCCAGTGT GAAGCGGTAA CGATGCTATG TTGCCAGGTG
ATGGGTAACG ATGTGGCCAT CAATATGGGG GGCGCATCGG GCAACTTTGA GCTCAACGTC
TATCGTCCGA TGGTTATTCA TAATTTTCTG CAAACGGTGC GCCTGCTGGC CGATGGCATG
GCGAGTTTCA ATCAACACTG TGCATCAGGA ATCGAGCCAA ACCGCGAGCG TATTACGCAG
TTGCTGAATG AGTCGCTGAT GCTGGTCACT GCGCTGAATA CGCACATCGG TTACGATAAA
GCGGCGGAGA TTGCGAAGAA GGCGCATAAA GAAGGGCTGA CGCTCAAAGC CTCAGCCGTG
GCATTAGGAT ATCTTAGCGA TGAGGAGTTC GACGCCTGGG TACGTCCGGA ATTGATGGTT
GGCAGTATGA CGCCGGGACG TTAA
 
Protein sequence
MVTVRREKDS MGAIEVPADK LWGAQTQRSL EHFRISTEKM PVSLIHALAL TKRAAAKVNQ 
DLGLLAAEKA SAIIQAADEV LAGKHADEFP LAIWQTGSGT QSNMNMNEVL ANRASEILGG
VRGMERKVHP NDDVNKSQSS NDVFPTAMHV AALLALREHL IPQLSALTDT LRDKSHAFAD
IVKIGRTHLQ DATPLTLGQE ISGWVAMLEH NLRHIEHSLP HVAELALGGT AVGTGLNTHP
EYARRVAEEL ATITAAPFVT APNKFEALAT CDALVQAHGA LKGLAASLMK IANDVRWLAS
GPRCGIGEIA IPENEPGSSI MPGKVNPTQC EAVTMLCCQV MGNDVAINMG GASGNFELNV
YRPMVIHNFL QTVRLLADGM ASFNQHCASG IEPNRERITQ LLNESLMLVT ALNTHIGYDK
AAEIAKKAHK EGLTLKASAV ALGYLSDEEF DAWVRPELMV GSMTPGR