Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1549 |
Symbol | tppB |
ID | 6515467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1490366 |
End bp | 1491871 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642746661 |
Product | putative tripeptide transporter permease |
Protein accession | YP_002114464 |
Protein GI | 194737597 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.507438 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTACTG CAAACAAAAA ACCAACTGAA AGCGTCAGTT TGAACGCTTT CAAACAACCG AAGGCGTTCT ATCTCATCTT CTCGATAGAG TTATGGGAGC GTTTTGGTTA TTACGGCCTG CAAGGCATTA TGGCCGTCTA CCTGGTAAAA CAACTGGGTA TGTCAGAAGC GGATTCCATC ACCCTTTTCT CTTCCTTCAG TGCGCTGGTG TACGGCTTGG TCGCCATTGG CGGTTGGTTA GGTGATAAAA TTCTGGGCAC CAAACGCGTT ATTATGCTGG GTGCCGTGGT GCTGGCTATC GGTTATGCGC TGGTCGCATG GTCTGGTCAT GACGCTGGCA TCGTCTATAT GGGCATGGCG GCTATCGCTG TGGGTAACGG TCTGTTTAAA GCTAACCCGT CTTCCCTGCT GTCTACCTGT TACGCGAAGG ACGATCCGCG TCTCGACGGC GCATTTACGA TGTATTATAT GTCCGTCAAC ATCGGCTCCT TCTTCTCTAT GCTGGCGACG CCGTGGCTGG CGGCGCGTTA TGGCTGGAGC ACCGCGTTTG CGCTTAGCGT CGTCGGTATG CTGATAACCG TCGTTAACTT TGCTTTCTGC CAGCGTTGGG TGAAAAGCTA CGGTTCCAAA CCCGACTTTG AACCGATCAA CTTCCGTAAT CTGCTGCTGA CAATCGTGGG TATTGTCGTT CTGATTGCGG TCGCCACCTG GCTGCTGCAC AACCAGGACA TCGCGCGTAT GGTGCTGGGC GTAATCGCTC TTGGCATCGT CATTATCTTC GGTAAAGAAG CGTTTTCCAT GCACGGCGCG GCTCGCCGTA AAATGATCGT CGCCTTTATT TTGATGCTGC AGGCGATTAT CTTCTTCGTA CTGTACAGCC AGATGCCGAC GTCGCTGAAC TTCTTTGCCA TTCGTAACGT CGAGCACTCT ATTCTCGGTA TCGCGTTCGA ACCGGAACAG TATCAGGCGC TGAACCCATT CTGGATCATT ATCGGCAGCC CGATTCTGGC CGCTATCTAT AACAGGATGG GCGATACGCT GCCGATGCCG ATGAAATTCG CCATTGGTAT GGTGCTGTGT TCCGGCGCGT TCCTGATTCT GCCGCTGGGC GCCAAATTTG CGAACGATGC CGGCATCGTA TCCGTAAACT GGCTGATCGC AAGCTACGGC CTGCAAAGTA TCGGTGAGCT GATGATCTCC GGTCTGGGAC TGGCAATGGT CGCACAGTTG GTTCCGCAGC GTCTGATGGG CTTCATCATG GGTAGCTGGT TCCTGACAAC GGCAGGCGCT AACATCATCG GCGGTTATGT CGCCAACCTG ATGGCTGTGC CGAGCGACGT GACTGACCCA CTGATGTCCC TGGAAGTCTA TGGTCGCGTA TTTATGCAGA TTGGCATAGC AACCGCCGTT ATCGCCATCC TGATGCTGCT GACAGCGCCT AAGCTGAACC GTATGACCCA GGACGATGAT AACGCTGAAA AAGGCTCTAA AGCCGCTACA GTTTAA
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Protein sequence | MSTANKKPTE SVSLNAFKQP KAFYLIFSIE LWERFGYYGL QGIMAVYLVK QLGMSEADSI TLFSSFSALV YGLVAIGGWL GDKILGTKRV IMLGAVVLAI GYALVAWSGH DAGIVYMGMA AIAVGNGLFK ANPSSLLSTC YAKDDPRLDG AFTMYYMSVN IGSFFSMLAT PWLAARYGWS TAFALSVVGM LITVVNFAFC QRWVKSYGSK PDFEPINFRN LLLTIVGIVV LIAVATWLLH NQDIARMVLG VIALGIVIIF GKEAFSMHGA ARRKMIVAFI LMLQAIIFFV LYSQMPTSLN FFAIRNVEHS ILGIAFEPEQ YQALNPFWII IGSPILAAIY NRMGDTLPMP MKFAIGMVLC SGAFLILPLG AKFANDAGIV SVNWLIASYG LQSIGELMIS GLGLAMVAQL VPQRLMGFIM GSWFLTTAGA NIIGGYVANL MAVPSDVTDP LMSLEVYGRV FMQIGIATAV IAILMLLTAP KLNRMTQDDD NAEKGSKAAT V
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