Gene SeSA_A1528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1528 
Symbol 
ID6517584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1474035 
End bp1474856 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content51% 
IMG OID642746640 
ProductNlpC/P60 family protein 
Protein accessionYP_002114443 
Protein GI194734354 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGGA TAAACAAAAT CTCGATCACG CTCTGTGCTT TACTTTTTAC TACTCTCCCT 
TTTACGCCAA TGGCCCATGC TTCCAGGCAA GCCAAAGCGA CGCCTGCTGT TTCTCATGTC
ACGAAAACGG CAGATAAAAA GAAAAGCACA ACGAAAAAGA TCAGTAAGAC CAGCAAAAAA
AACGTAAAAA AAACCTCAAA AACCAGCCGT TCTTCTTCCG CTTCTACGCC AAAACGTACC
ACCGCCTCCA CGAAATCTCG TCATACGACG CATCGTCGTA ACAGAACCGC GCCCACGTCA
ATCGCCGCCC TCGACGTAAC GGAAAAATGC ACGACGCGTA AAGGCCGTAA GCCGCACTGC
GTGAAGGGGA AAGGAACATT GCCGGTCTCT ATTGCCGATG CGCATCGTGC AAAAGTACAA
AAAGCGACGA AAACCGCGAT GTCCAAACTC ATGAATCAGA TTGGTAAACC GTATCACTGG
GGAGGCGCGT CGCCGCGCAC CGGTTTTGAT TGCAGCGGTC TGGTTTATTA TGCCTATAAA
GATTTAGTGA AGATCCGTAT CCCCCGAACG GCGAATGAGA TGTATCACCT GCGTGACGCG
GCGCCCATTG AGCGTAGCGA GTTGAAAAAC GGCGATCTGG TGTTCTTTCG TACGCAGGGG
CGCGGCACCG CCGATCACGT TGGCGTCTAT GTCGGCAACG GTAAGTTTAT CCAGTCTCCG
CGCAGCGGTC AGGAAATTAA GATCACCTCA CTGAACGAAG AGTACTGGCA GCGTCATTAT
GTCGGCGCCC GTCGGGTGAT GACGCCTAAA ACAATTCGCT AA
 
Protein sequence
MARINKISIT LCALLFTTLP FTPMAHASRQ AKATPAVSHV TKTADKKKST TKKISKTSKK 
NVKKTSKTSR SSSASTPKRT TASTKSRHTT HRRNRTAPTS IAALDVTEKC TTRKGRKPHC
VKGKGTLPVS IADAHRAKVQ KATKTAMSKL MNQIGKPYHW GGASPRTGFD CSGLVYYAYK
DLVKIRIPRT ANEMYHLRDA APIERSELKN GDLVFFRTQG RGTADHVGVY VGNGKFIQSP
RSGQEIKITS LNEEYWQRHY VGARRVMTPK TIR