Gene SeSA_A1525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1525 
Symbol 
ID6518159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1470905 
End bp1471837 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content57% 
IMG OID642746637 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002114440 
Protein GI194738112 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGTCGG AATACTCGCT TGAAGTGGTT GACGCCGTGG CGCGCAATGG CAGTTTTAGC 
GCGGCGGCGC AGGAACTGCA CCGTGTGCCT TCAGCAGTCA GTTACACCGT TCGTCAGCTA 
GAGGAGTGGC TGGCCGTACC GCTTTTTGTA CGACGTCACC GTGATGTTGA ACTGACGCCT 
GCTGGCATCT GGTTTTTAAA AGAAGGGCGT TCTGTTATCA AAAAAATGCA GATCACTCGC 
CAGCAGTGTC AGCAAATTGC TAATGGCTGG CGCGGGCAGT TAGCTATTGC GGTGGACAAT 
ATCGTCAGAC CAGAACGTAC CCGGCAGATG ATCGTCGATT TCTATCGCCA TTTTGACGAT 
GTGGAACTGC TGGTTTTTCA GGAGGTGTTT AACGGCGTCT GGGACGCGCT CTCCGACGGG 
CGTGTCGAAC TGGCGATTGG GGCGACGCAG GCGATTCCGG TAGGGGGGCG TTACGCTTTT 
CGGGATATGG GGACCCTGAG CTGGAGCTGC GTAGTGGCAA GCGATCATCC GCTGGCGTCA 
ATGCCTGGGC CGTTAAGCGA CGATACCCTG CGCAACTGGC CGTCGCTGGT CAGGGAAGAC 
ACTTCGCGAA CCTTACCGAA ACGGATTACC TGGTTGCTGG ATAACCAAAA AAGGGTCGTC 
GTACCGGACT GGGAGTCATC GGCAACCTGC CTGTCGGCAG GACTATGCGT GGGAATGGTG 
CCGACGCATT TTGCCCGACA GTGGATAGAC AGCGGAAAAT GGGTGGCGCT GACGTTAGAG 
AATCCGTTTC CCGATGCGGC CTGTTGCGTG ACGTGGCAGC AAAACGAGGC CTCGCCCGCG 
CTGGCATGGC TGCTGGACTA TTTGGGCGAT AGCGAAACGT TGAATCGGGA GTGGCTTCGG 
GAGCCAGAAG AGGCTCCCGA CTGCGGGGAT TAA
 
Protein sequence
MWSEYSLEVV DAVARNGSFS AAAQELHRVP SAVSYTVRQL EEWLAVPLFV RRHRDVELTP 
AGIWFLKEGR SVIKKMQITR QQCQQIANGW RGQLAIAVDN IVRPERTRQM IVDFYRHFDD 
VELLVFQEVF NGVWDALSDG RVELAIGATQ AIPVGGRYAF RDMGTLSWSC VVASDHPLAS 
MPGPLSDDTL RNWPSLVRED TSRTLPKRIT WLLDNQKRVV VPDWESSATC LSAGLCVGMV 
PTHFARQWID SGKWVALTLE NPFPDAACCV TWQQNEASPA LAWLLDYLGD SETLNREWLR 
EPEEAPDCGD