Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1521 |
Symbol | |
ID | 6520017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1465876 |
End bp | 1467249 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642746633 |
Product | multidrug efflux protein |
Protein accession | YP_002114436 |
Protein GI | 194738332 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0251273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGAAGT ATACCAGTGA AGCGCGTCAG CTATTAGCGT TAGCGATACC GGTGATCCTT GCGCAAGTGG CACAGACCGC AATGGGATTC GTCGATACCG TCATGGCAGG AGGCTATAGC GCTACGGACA TGGCTGCCGT CGCTATCGGC ACCTCTATCT GGCTTCCCGC CATTTTGTTT GGTCACGGCT TACTGCTGGC CTTGACGCCT GTGATTGCGC AACTCAATGG CTCCGGCCGT CGTGAGCGTA TCGCGCATCA GGTTCGACAA GGGTTCTGGC TGGCGGGCTT TGTCTCCGTG CTGGTGATGA TCGTCCTGTG GAATGCCGGA TACATTATCC GCTCTATGCA TAATATTGAT CCGGCGCTGG CCGATAAAGC CGTGGGTTAT CTTCGCGCGC TACTGTGGGG CGCGCCAGGA TACCTTTTCT TTCAGGTAGC GCGAAACCAG TGCGAAGGTC TTGCCAAAAC CAAACCGGGT ATGGTGATGG GATTTTTGGG CCTGCTGGTG AATATTCCGG TGAACTATAT TTTTATCTAT GGCCATTTTG GTATGCCTGA ACTCGGCGGT ATCGGCTGCG GCGTTGCGAC CGCGGCGGTC TATTGGGTGA TGTTTATCGC CATGCTTTCT TACATTAAAC ACGCGCGTTC AATGCGTGAT ATTCGTAATG AAACAGGCTT TGGCAAACCC GATAGCGTCG TCATGAAGCG CCTGATTCAA CTAGGGTTAC CGATTGCGCT GGCGCTGTTC TTTGAAGTGA CGTTGTTTGC GGTCGTTGCG CTGCTGGTTT CGCCATTAGG TATTGTGGAT GTCGCGGGTC ATCAGATTGC GCTTAACTTT AGCTCGCTGA TGTTCGTACT GCCGATGTCG CTGGCTGCGG CGGTAACGAT TCGAGTGGGT TATCGTCTGG GCCAGGGCTC AACGCTGGAT GCGCAAACCG CAGCGCGTAC CGGTTTAGGC GTCGGCATTT GTATGGCTGT GGTTACCGCG ATCTTTACCG TTACTCTGCG TAAGCATATT GCTTTGCTCT ACAATGACAA CCCCGAGGTC GTGGCGCTTG CCGCGCAATT AATGCTGCTC GCCGCGGTTT ATCAGATTTC CGACTCTATA CAGGTTATCG GCAGCGGTAT TCTGCGCGGT TATAAAGATA CGCGTTCCAT CTTTTTTATC ACCTTTACCG CCTACTGGGT GTTAGGTTTA CCCAGCGGTT ATATCCTGGC GTTAACGGAT CTGGTGGTGG ATCGTATGGG ACCGGCAGGC TTCTGGATGG GGTTCATCAT CGGCCTGACC TCGGCGGCGG TGTTAATGAT GCTACGGATG CGCTATCTAC AACGTCAGCC GTCCGCCATC ATTTTGCAGC GCGCTGCGCG ATAA
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Protein sequence | MQKYTSEARQ LLALAIPVIL AQVAQTAMGF VDTVMAGGYS ATDMAAVAIG TSIWLPAILF GHGLLLALTP VIAQLNGSGR RERIAHQVRQ GFWLAGFVSV LVMIVLWNAG YIIRSMHNID PALADKAVGY LRALLWGAPG YLFFQVARNQ CEGLAKTKPG MVMGFLGLLV NIPVNYIFIY GHFGMPELGG IGCGVATAAV YWVMFIAMLS YIKHARSMRD IRNETGFGKP DSVVMKRLIQ LGLPIALALF FEVTLFAVVA LLVSPLGIVD VAGHQIALNF SSLMFVLPMS LAAAVTIRVG YRLGQGSTLD AQTAARTGLG VGICMAVVTA IFTVTLRKHI ALLYNDNPEV VALAAQLMLL AAVYQISDSI QVIGSGILRG YKDTRSIFFI TFTAYWVLGL PSGYILALTD LVVDRMGPAG FWMGFIIGLT SAAVLMMLRM RYLQRQPSAI ILQRAAR
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