| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A1518 |
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| Symbol | |
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| ID | 6516048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 1464335 |
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| End bp | 1465393 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642746630 |
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| Product | secretion system apparatus protein SsaU |
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| Protein accession | YP_002114435 |
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| Protein GI | 194734066 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4792] Type III secretory pathway, component EscU |
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| TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00925486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGA AAACAGAACA GCCTACAGAA AAGAAATTAC GTGATGGCCG TAAGGAAGGG
CAGGTCGTCA AAAGTATTGA AATAACATCA TTATTTCAGC TGATTGCGCT TTATTTGTAT
TTTCATTTCT TTACTGAAAA GATGATTTTG ATACTGATTG CGTCAATAAC TTTCACATTA
CAATTAGTAA ATAAGCCATT TTCTTATGCA TTAACGCAAT TGACTCATGC TTTGATAGAG
TCATTGACTT CTGCACTGCT GTTTCTGGGC GCAGGGGTAA TAGTTGCTAC TGTGGGTAGC
GTGTTTCTTC AGGTGGGGGT GGTTATTGCC AGCAAGGCCA TTGGTTTTAA AAGCGAGCAT
ATAAATCCGG TAAGTAATTT TAAGCAGATA TTCTCTTTAC ATAGCGTAGT GGAATTATGT
AAATCCAGCC TAAAAGTTAT CATGCTATCT CTTATCTTTG CCTTTTTCTT TTATTATTAT
GCCAGTACTT TTCGGGCACT ACCGTACTGT GGGTTAGCCT GTGGCCTGCT TGTAGTTTCT
TCTTTAATAA AATGGTTATG GGTAGGGGTG ATGGCTTTTT ATATCGTCGT TGGCATACTG
GACTATTCTT TTCAATATTA TAAGATTAGA AAAGATCTAA AAATGAGTAA AGATGACGTA
AAACAGGAGC ATAAAGATCT GGAGGGAGAC CCTCAAATGA AGACACGGCG TCGGGAAATG
CAGAGTGAAA TACAAAGTGG GAGTTTAGCT CAATCTGTTA AACAATCTGT TGCGGTAGTG
CGTAATCCAA CGCATATTGC GGTTTGTCTT GGCTATCATC CCACCGATAT GCCAATACCA
CGCGTTCTGG AAAAAGGTAG TGATGCTCAA GCTAACTATA TTGTTAACAT CGCTGAACGC
AACTGCATCC CCGTTGTTGA AAATGTTGAG CTGGCCCGCT CATTATTTTT TGAAGTGGAA
CGTGGAGATA AAATTCCTGA AACGTTATTT GAACCCGTTG CAGCCTTGTT ACGTATGGTG
ATGAAGATAG ATTATGCGCA TTCTACCGAA ACACCATAA
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| Protein sequence | MSEKTEQPTE KKLRDGRKEG QVVKSIEITS LFQLIALYLY FHFFTEKMIL ILIASITFTL
QLVNKPFSYA LTQLTHALIE SLTSALLFLG AGVIVATVGS VFLQVGVVIA SKAIGFKSEH
INPVSNFKQI FSLHSVVELC KSSLKVIMLS LIFAFFFYYY ASTFRALPYC GLACGLLVVS
SLIKWLWVGV MAFYIVVGIL DYSFQYYKIR KDLKMSKDDV KQEHKDLEGD PQMKTRRREM
QSEIQSGSLA QSVKQSVAVV RNPTHIAVCL GYHPTDMPIP RVLEKGSDAQ ANYIVNIAER
NCIPVVENVE LARSLFFEVE RGDKIPETLF EPVAALLRMV MKIDYAHSTE TP
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