Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1454 |
Symbol | aroD |
ID | 6516486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 1403586 |
End bp | 1404344 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642746570 |
Product | 3-dehydroquinate dehydratase |
Protein accession | YP_002114375 |
Protein GI | 194734603 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0710] 3-dehydroquinate dehydratase |
TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.287229 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.181564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCG TAACTGTAAG AGATCTCGTG GTTGGCGAAG GCGCGCCAAA GATCATTGTG TCGCTAATGG GAAAAACCAT TACCGATGTG AAATCGGAAG CACTCGCCTA CCGTGAAGCG GATTTCGATA TTCTGGAGTG GCGCGTTGAC CATTTTGCCA ACGTGACGAC GGCAGAAAGC GTACTTGAGG CCGCCGGCGC CATCCGGGAG ATTATTACCG ATAAACCCTT GCTATTTACC TTCCGCAGCG CGAAAGAAGG CGGCGAACAG GCGCTAACCA CCGGACAGTA TATCGCTCTG AATCGTGCAG CGGTTGACAG CGGTCTGGTC GATATGATCG ATCTTGAGCT TTTTACCGGC GACGATGAGG TGAAAGCCAC CGTCGGCTAT GCTCATCAAC ACAATGTTGC GGTGATCATG TCTAACCATG ATTTTCATAA AACGCCCGCA GCGGAAGAGA TTGTTCAGCG TCTGCGTAAA ATGCAGGAAC TGGGCGCCGA TATTCCGAAG ATCGCCGTCA TGCCACAGAC TAAAGCCGAT GTCCTGACCT TACTTACCGC CACTGTAGAA ATGCAGGAGC GCTATGCGGA TCGTCCGATT ATTACCATGT CGATGTCGAA AACCGGGGTA ATATCTCGTC TTGCCGGCGA AGTGTTCGGT TCTGCAGCAA CGTTTGGCGC GGTGAAAAAA GCATCTGCGC CGGGACAAAT ATCGGTAGCC GATCTGCGTA CCGTATTAAC TATATTGCAC CAGGCGTAA
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Protein sequence | MKTVTVRDLV VGEGAPKIIV SLMGKTITDV KSEALAYREA DFDILEWRVD HFANVTTAES VLEAAGAIRE IITDKPLLFT FRSAKEGGEQ ALTTGQYIAL NRAAVDSGLV DMIDLELFTG DDEVKATVGY AHQHNVAVIM SNHDFHKTPA AEEIVQRLRK MQELGADIPK IAVMPQTKAD VLTLLTATVE MQERYADRPI ITMSMSKTGV ISRLAGEVFG SAATFGAVKK ASAPGQISVA DLRTVLTILH QA
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