Gene SeSA_A1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1452 
Symbol 
ID6519255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1400672 
End bp1401823 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content50% 
IMG OID642746568 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_002114373 
Protein GI194738369 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.215854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.288661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CATTAACTGA AGAACAAGAA CTATTACTGG CCAGTATTCG CGAGTTAATC 
ACCAGCAATT TTCCGGAAGA GTATTTCCGT ACCTGCGATC AAACGGGCAC CTATCCCAAA 
GAATTTATGC AGGCGCTGGC GGAAAACGGT ATTTCGATGC TGGGCGTCCC GGAAGAATTC 
GGCGGCATTC CGGCTGACTA TGTAACGCAA ATGCTGGCGC TGATGGAAAT CTCAAAATGC 
GGCGCTCCGG CCTTTTTGAT TACCAACGGC CAATGCATTC ACAGTATGCG CCGTTTTGGT 
TCCGCAGAAC AACTGCGTAA AACAGCAGAA AGCACTCTGG CCACCGGCGA TCCAGCATAT 
GCGCTCGCCT TAACAGAACC TGGCGCGGGA TCTGATAATA ATAGCGCCAC AACAACCTGG 
ACGCGTAAAA ACGGCAAGGT TTATCTTAAC GGCCAAAAAA CGTTTATCAC CGGTGCAAAA 
GAATATCCTT ACATGCTGGT TCTGGCGCGC GATACGGAGC CAAAAGATCC TAAAAAAGCG 
TTCACGCTTT GGTGGGTGGA CTCAAATAAA CCGGGCATAA AGATTAATCC GCTGCATAAA 
ATTGGCTGGC ACATGTTGAG TACATGCGAA GTTTATCTCG ATAATGTCGA GGTTGACGAA 
AGCGACCGGG TCGGTGAGGA AGGCATGGGT TTCCTCAATG TCATGTACAA TTTTGAGATG 
GAGCGTTTGA TTAATGCGGC GCGCAGTACA GGTTTCGCCG AATGCGCATT TGAAGATGCC 
GCCCGTTACG CCAACCAGCG TATCGCCTTT GGTAAACCCA TCGGCCATAA CCAGATGATC 
CAGGAAAAGC TGGCGTTAAT GGCCATCAAA ATCGAAAACA TGCGCAATAT GGTGTTGAAA 
GTCGCCTGGC AGGCCGATCG GGAAGAGTCA CTGCGTACCA GCGCCGCGCT GGCTAAGCTG 
TACTGCGCAC GCACAGCGAT GGAAGTGATT GACGATGCGA TTCAGATTAT GGGTGGGCTT 
GGTTATACTG ACGAAGCCCG TGTCTCCCGC TTCTGGCGCG ATGTTCGCTG CGAACGTATC 
GGTGGCGGCA CGGATGAAAT TATGATCTAT GTGGCAGGAC GCCAGATTCT GAAAGACTAT 
CAGAACAAGT AA
 
Protein sequence
MDFSLTEEQE LLLASIRELI TSNFPEEYFR TCDQTGTYPK EFMQALAENG ISMLGVPEEF 
GGIPADYVTQ MLALMEISKC GAPAFLITNG QCIHSMRRFG SAEQLRKTAE STLATGDPAY 
ALALTEPGAG SDNNSATTTW TRKNGKVYLN GQKTFITGAK EYPYMLVLAR DTEPKDPKKA 
FTLWWVDSNK PGIKINPLHK IGWHMLSTCE VYLDNVEVDE SDRVGEEGMG FLNVMYNFEM 
ERLINAARST GFAECAFEDA ARYANQRIAF GKPIGHNQMI QEKLALMAIK IENMRNMVLK 
VAWQADREES LRTSAALAKL YCARTAMEVI DDAIQIMGGL GYTDEARVSR FWRDVRCERI 
GGGTDEIMIY VAGRQILKDY QNK