Gene SeSA_A1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1381 
Symbol 
ID6517543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1331904 
End bp1333100 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content50% 
IMG OID642746499 
Productchondroitin sulfate/heparin utilization regulation protein 
Protein accessionYP_002114304 
Protein GI194736621 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.238344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAG TATTCAATAC CGTAGCCAAG CCCAGCGGCA GTCTGTGTAA CTTATCCTGC 
AAGTACTGTT TCTATCTTGA TAAACCCCGG GGCCAGCGCG TCATGTCTGA CGATGTGCTG
GAGACGTATA TCCGCCGGGT AATTGATGAT ACGCCATCCT CAGAGGTCTC GTTTTGTTGG
CAGGGGGGAG AGCCGACGCT ATGCGGTCTT TCTTTTTACC AAAAAGTGGT GCGCTTGCAG
CAACGCTATG CCAACGGCAA AACTATTTAC AACAGTCTGC AAACCAATGG CGTATTAATC
AATGAAGAAT GGGCGGCTTT CTTTGCGCAG CACCAGTTCC TGATTGGTAT ATCGATTGAT
GGGCCGCAAG TCGTTCATGA TAATTACCGG AAAACGCCGT CAGGGCGGGC GTCTTTTTCC
CGTGTCGTTA ATGCTATCCG CCTTCTGCAG GCAAATGATG TCGAGTTCAA CACGCTCACT
GTCGTGAATG ATGTGTCATG CCGTCATGGC AACGCTATTT ATCATTTTTT GACGCAGGAA
TTGGAAAGTA AACACCTGCA ATTTATTCCC ATTGTTGAGC CGCTCGCGCA AAAAACGCAG
CGTTCTTTGA CGTTATCTGA CAATGAGGAT TCGCCTTCGC TGATGCCCTT TTCCGTCACG
CCTGAAGGGT GGGGCGCCTT TATGTGCGAT GTTTTTGATC AATGGATACG TCACGATGTC
GGACGCATAT TCGTACAGCT TTTTGACAAC TTACTTGGCG TCTGGATGGG GGAGCCCGCC
ACGCTTTGTA CGATGCAGTC GACCTGCGGG CAAAGTTTGC TGGTGGAGCA GAATGGCGAC
GTGTTTAGCT GTGACCATTT TGTTTTTCCC GCCTATAAAC TGGGCAATCT GCAGCAACAC
TCTTTAGAAG AAATGGCGGC TTCTTCTTTT CAGCAGCAGT TTGGCGCGGC TAAAGCAAAC
CTTTCCTCAC GCTGCCAGAA CTGTACGTGG CGCTTTGCCT GTCACGGCGG TTGTCCGAAA
CATCGAATTT GCATGGACGG CGGCGAACGG CAAAATTATC TCTGTAAAGG ATATCTGGAG
TTCTTTCAAC ATGTGACGCC CTATATGAAT GTGATGCGTC AATTATTACT GAATCAGCGA
CCCGCCGCGC ATATTACCCG CATCGTCGAC ATGATTGCGG ATGACGTTCG TCAGTGA
 
Protein sequence
MSIVFNTVAK PSGSLCNLSC KYCFYLDKPR GQRVMSDDVL ETYIRRVIDD TPSSEVSFCW 
QGGEPTLCGL SFYQKVVRLQ QRYANGKTIY NSLQTNGVLI NEEWAAFFAQ HQFLIGISID
GPQVVHDNYR KTPSGRASFS RVVNAIRLLQ ANDVEFNTLT VVNDVSCRHG NAIYHFLTQE
LESKHLQFIP IVEPLAQKTQ RSLTLSDNED SPSLMPFSVT PEGWGAFMCD VFDQWIRHDV
GRIFVQLFDN LLGVWMGEPA TLCTMQSTCG QSLLVEQNGD VFSCDHFVFP AYKLGNLQQH
SLEEMAASSF QQQFGAAKAN LSSRCQNCTW RFACHGGCPK HRICMDGGER QNYLCKGYLE
FFQHVTPYMN VMRQLLLNQR PAAHITRIVD MIADDVRQ