Gene SeSA_A1310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1310 
Symbol 
ID6516911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1282385 
End bp1283059 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content51% 
IMG OID642746430 
ProductDNA-binding transcriptional regulator PhoP 
Protein accessionYP_002114238 
Protein GI194736162 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.237463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG TACTGGTTGT AGAGGATAAT GCATTATTAC GCCACCACCT GAAGGTTCAG 
CTCCAGGATT CAGGTCACCA GGTCGATGCC GCAGAAGATG CCAGGGAAGC TGATTATTAC
CTTAATGAAC ACCTTCCGGA TATCGCTATT GTCGATTTAG GTCTGCCGGA TGAAGACGGC
CTTTCCTTAA TACGCCGCTG GCGCAGCAGT GATGTTTCAC TGCCGGTTCT GGTGTTAACC
GCGCGCGAAG GTTGGCAGGA TAAAGTCGAG GTTCTCAGCT CCGGGGCCGA TGACTACGTG
ACGAAGCCAT TCCACATCGA AGAGGTAATG GCGCGTATGC AGGCGTTAAT GCGCCGTAAT
AGCGGTCTGG CCTCCCAGGT GATCAACATC CCGCCTTTCC AGGTGGATCT CTCACGCCGG
GAATTATCCG TCAATGAAGA GGTCATCAAA CTCACGGCGT TCGAATACAC CATTATGGAA
ACGCTTATCC GTAACAACGG TAAAGTGGTC AGCAAAGATT CGCTGATGCT TCAGCTGTAT
CCGGATGCGG AACTGCGGGA AAGTCATACC ATTGATGTTC TCATGGGGCG TCTGCGGAAA
AAAATACAGG CCCAGTATCC GCACGATGTC ATTACCACCG TACGCGGACA AGGATATCTT
TTTGAATTGC GCTAA
 
Protein sequence
MMRVLVVEDN ALLRHHLKVQ LQDSGHQVDA AEDAREADYY LNEHLPDIAI VDLGLPDEDG 
LSLIRRWRSS DVSLPVLVLT AREGWQDKVE VLSSGADDYV TKPFHIEEVM ARMQALMRRN
SGLASQVINI PPFQVDLSRR ELSVNEEVIK LTAFEYTIME TLIRNNGKVV SKDSLMLQLY
PDAELRESHT IDVLMGRLRK KIQAQYPHDV ITTVRGQGYL FELR