Gene SeSA_A1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1288 
Symbol 
ID6516481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1260583 
End bp1261122 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID642746409 
Producthypothetical protein 
Protein accessionYP_002114217 
Protein GI194735753 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAT CAATGTTGGC GGGTATAGGG ATTGGCGTAG CGGCTGCGCT GGGTGTGGCG 
GCAGTGGCCA GTCTCAACGT ATTTGATCGT GGTCCGCAAT ATGCGCAGGT GATATCGGCT 
AAACCGATTA AAGAGACGGT AAAAACGCCG CGTCAGGAGT GCCGTAATGT CACGGTCACG 
CATCGCAGAC CGGTTCAGGA CGAAAACCGT ATTGCCGGCT CGGTGCTTGG CGCAGTAGCA 
GGCGGCGTGA TTGGACATCA ATTTGGCGGC GGTCGTGGTA AAGATGTGGC GACGGTCGTC 
GGGGCGCTGG GCGGCGGTTA TGCTGGCAAT CAAATCCAGG GATCAATGCA GGAAAGTGAT 
ACTTATACTA CCACGCAGCA ACGCTGTAAG ACGGTGTATG ACAAATCTGA AAAGATGCTT 
GGCTACGACG TGACCTATAA AATTGGCGAT CAGCAGGGCA AAATCCGCAT GGATAAAGAC 
CCCGGAACGC AAATTCCCCT CGACGGCAAT GGTCAACTGG TTCTGAATAA CAAAGCATAA
 
Protein sequence
MNKSMLAGIG IGVAAALGVA AVASLNVFDR GPQYAQVISA KPIKETVKTP RQECRNVTVT 
HRRPVQDENR IAGSVLGAVA GGVIGHQFGG GRGKDVATVV GALGGGYAGN QIQGSMQESD 
TYTTTQQRCK TVYDKSEKML GYDVTYKIGD QQGKIRMDKD PGTQIPLDGN GQLVLNNKA