Gene SeSA_A1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1276 
Symboltmk 
ID6517304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1248271 
End bp1248912 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID642746397 
Productthymidylate kinase 
Protein accessionYP_002114205 
Protein GI194733912 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.823229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGTA ATTATATCGT CATCGAGGGC CTGGAAGGCG CCGGAAAAAC CACTGCGCGC 
GACGTGGTGG TGGAGACCCT TGAGCAACTG GGTATTCGTA ACATGATTTT TACCCGTGAG 
CCGGGCGGTA CGCAGCTTGC CGAAAAACTG AGAAGTCTGG TGCTGGATAT TCGATCGGTA 
GGCGACGAAG TGATTACCGA TAAAGCGGAA GTGCTGATGT TTTATGCCGC TCGCGTACAG 
CTCGTCGAAA CGGTAATCAA ACCCGCGCTG GCGCAAGGCG TATGGGTGAT CGGCGATCGA 
CACGATCTCT CGACCCAGGC GTATCAGGGG GGAGGGCGCG GCATTGATCA AACCATGCTG 
GCGACACTAC GCGATGCCGT GCTGGGCGAT TTTCGCCCTG ACCTGACGCT GTATCTGGAT 
GTCACGCCGG AAGTCGGGCT AAAACGCGCC AGAGCGCGCG GCGATTTGGA TCGCATTGAG 
CAGGAATCTT TTGATTTCTT TAACCGGACT CGCGCGCGCT ATCTGGAACT GGCGGCGCAA 
GACTCGCGTA TCCGCACCAT TGACGCGACC CAGCCGCTGG ATGCCGTCAT GCGCGACATT 
CGCGCCACGG TGACGAAGTG GGTACAGGAG CAAGCGGCAT GA
 
Protein sequence
MGSNYIVIEG LEGAGKTTAR DVVVETLEQL GIRNMIFTRE PGGTQLAEKL RSLVLDIRSV 
GDEVITDKAE VLMFYAARVQ LVETVIKPAL AQGVWVIGDR HDLSTQAYQG GGRGIDQTML 
ATLRDAVLGD FRPDLTLYLD VTPEVGLKRA RARGDLDRIE QESFDFFNRT RARYLELAAQ 
DSRIRTIDAT QPLDAVMRDI RATVTKWVQE QAA