Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1263 |
Symbol | fabH |
ID | 6518087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1235614 |
End bp | 1236567 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746384 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_002114192 |
Protein GI | 194736862 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00141014 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.134616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTATACGA AGATTATTGG TACTGGCAGC TATCTGCCCG AACAAGTGCG GACTAACGCC GATCTGGAAA AAATGGTTGA GACCTCTGAC GAGTGGATTG TCACTCGTAC AGGTATTCGT GAACGCCATA TCGCCGCGCC GAATGAAACT GTCGCGACGA TGGGCTTTAC CGCTGCGAAT CGCGCGATTG AGATGGCGGG GATCGATAAA GACCAAATTG GCTTGATTGT GGTGGCTACC ACATCAGCAA CGCATGCATT TCCAAGCGCG GCATGTCAGA TTCAAAGTAT GCTCGGTATT AAAGGTTGCC CGGCGTTTGA TGTCGCGGCA GCGTGCGCAG GTTTCACCTA CGCGTTAAGC ATCGCCGACC AGTACGTTAA ATCCGGCGCG GTTAAACACG CGCTGGTGGT CGGTTCCGAT GTATTAGCCC GCACTTGCGA TCCTGGCGAT CGCGGTACGA TCATTATTTT CGGCGATGGC GCAGGCGCGG CCGTACTGAG CGCTTCTGAA GAACCGGGTA TTATCTCCAC TCATCTTCAT GCCGATGGCC GTTACGGTGA ATTACTGACC CTGCCGAATG CCGATCGCGT AAATCCGGAT AACCCGATTT ACCTGACGAT GGCGGGCAAT GAAGTCTTTA AAGTTGCGGT CACTGAACTG GCGCATATTG TCGATGAGAC GCTGGCGGCT AATAACCTGG ATCGCTCAGA ACTCGATTGG CTGGTGCCGC ATCAGGCTAA CCTGCGTATC ATTAGCGCGA CAGCGAAAAA ACTCGGCATG TCGATGGACA ATGTCGTCGT CACGCTGGAC AGGCACGGCA ATACCTCCGC GGCTTCTGTG CCGTGCGCGC TGGATGAAGC CGTGCGTGAC GGGCGAATTA AAGCCGGTCA GCTGGTATTG CTTGAAGCCT TCGGGGGTGG ATTCACCTGG GGCTCCGCGC TGATTCGTTT CTAG
|
Protein sequence | MYTKIIGTGS YLPEQVRTNA DLEKMVETSD EWIVTRTGIR ERHIAAPNET VATMGFTAAN RAIEMAGIDK DQIGLIVVAT TSATHAFPSA ACQIQSMLGI KGCPAFDVAA ACAGFTYALS IADQYVKSGA VKHALVVGSD VLARTCDPGD RGTIIIFGDG AGAAVLSASE EPGIISTHLH ADGRYGELLT LPNADRVNPD NPIYLTMAGN EVFKVAVTEL AHIVDETLAA NNLDRSELDW LVPHQANLRI ISATAKKLGM SMDNVVVTLD RHGNTSAASV PCALDEAVRD GRIKAGQLVL LEAFGGGFTW GSALIRF
|
| |