Gene SeSA_A1245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1245 
SymbolflgE 
ID6516362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1218114 
End bp1219325 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content56% 
IMG OID642746368 
Productflagellar hook protein FlgE 
Protein accessionYP_002114176 
Protein GI194736988 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.273192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTT CTCAAGCGGT TAGCGGCCTG AACGCTGCGG CCACCAACCT TGATGTTATC 
GGTAATAACA TCGCCAACTC CGCCACCTAT GGCTTTAAGT CCGGTACGGC ATCATTTGCC
GATATGTTTG CCGGTTCCAA AGTGGGGCTG GGCGTAAAAG TGGCGGGGAT TACCCAGGAT
TTTACCGACG GTACGACAAC GAACACCGGG CGCGGGCTGG ATGTCGCGAT TAGCCAGAAC
GGTTTTTTCC GCCTGGTAGA CAGCAACGGT TCCGTGTTCT ATAGCCGCAA CGGCCAGTTC
AAACTGGACG AGAACCGTAA CCTGGTCAAT ATGCAGGGGA TGCAGTTGAC CGGCTATCCG
GCCACCGGTA CGCCGCCGAC CATTCAGCAG GGGGCGAATC CTGCGCCGAT CACCATTCCG
AACACGCTGA TGGCGGCGAA ATCGACCACC ACCGCGTCAA TGCAGATCAA CCTGAACTCG
ACGGACCCTG TACCGTCTAA AACGCCCTTT AGCGTGAGTG ATGCGGATTC GTATAACAAA
AAAGGCACCG TCACCGTTTA TGACAGCCAG GGTAATGCCC ATGACATGAA CGTCTATTTT
GTGAAAACCA AAGATAATGA ATGGGCCGTG TACACCCATG ACAGTAGCGA TCCTGCAGCC
ACAGCGCCGG CGGCACCATC AACCACTCTG GTATTTAACG CAAACGGGAC ACTGCAATCC
GGCGGTACGG TGAACATCAC CACCGGTACG ATTAATGGCG CGACAGCGGC CACCTTCTCC
CTCAGCTTCC TTAACTCCAT GCAGCAGAAC ACCGGGGCTA ACAACATCGT CGCCACCAAT
CAGAACGGCT ATAAGCCGGG CGACCTGGTG AGCTACCAGA TTAACAACGA TGGCACCGTA
GTTGGCAACT ATTCCAACGA ACAGGAGCAG GTGCTGGGGC AGATTGTGCT GGCTAACTTC
GCCAACAACG AAGGTCTGGC ATCCCAGGGC GATAACGTCT GGGCGGCGAC GCAGGCCTCC
GGGGTTGCGC TGCTGGGGAC TGCCGGTTCC GGCAACTTCG GTAAGCTGAC GAACGGCGCG
CTGGAAGCCT CTAACGTGGA TTTGAGTAAA GAGCTGGTGA ATATGATCGT CGCGCAGCGT
AACTACCAGT CGAATGCGCA GACCATCAAA ACCCAGGACC AGATCCTCAA TACGCTGGTT
AACCTGCGCT AA
 
Protein sequence
MSFSQAVSGL NAAATNLDVI GNNIANSATY GFKSGTASFA DMFAGSKVGL GVKVAGITQD 
FTDGTTTNTG RGLDVAISQN GFFRLVDSNG SVFYSRNGQF KLDENRNLVN MQGMQLTGYP
ATGTPPTIQQ GANPAPITIP NTLMAAKSTT TASMQINLNS TDPVPSKTPF SVSDADSYNK
KGTVTVYDSQ GNAHDMNVYF VKTKDNEWAV YTHDSSDPAA TAPAAPSTTL VFNANGTLQS
GGTVNITTGT INGATAATFS LSFLNSMQQN TGANNIVATN QNGYKPGDLV SYQINNDGTV
VGNYSNEQEQ VLGQIVLANF ANNEGLASQG DNVWAATQAS GVALLGTAGS GNFGKLTNGA
LEASNVDLSK ELVNMIVAQR NYQSNAQTIK TQDQILNTLV NLR