Gene SeSA_A1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1135 
Symbol 
ID6515646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1121988 
End bp1122593 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content50% 
IMG OID642746262 
ProductTfoX family protein 
Protein accessionYP_002114072 
Protein GI194734303 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0564701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.981873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGCAC TCTCTTATGA CAGGATCTAT AAATCGCAAG AATATTTGGC CTCTTTGGGG 
ACGATCCAGT ATCGATCTTT ATTCGGTAGC TATAGTCTGA CCGTGGAGGA TACCGTCTTT 
GCGATGGTGG CTAATGGCGA GCTTTATCTC CGCGCCTGTG AAGAAAGCGT ACCCTACTGT 
GTGAAGCATC CTCCCGCCTG GCTCATGTTT ATGAAATGTG GACGTCCCGT TATGCTCAAC 
TATTACCGGG TGGATGAAAG CCTGTGGCGC GATCAGCAGC AGCTGGTACG TTTATCGAAG 
TATTCTCTTG ACGCGGCAAT GAAGGAAAAA CACAGCCGTA TTTTACAGCA CAGACTCAAA 
GATCTCCCCA ATATGACCTT CCATCTGGAA ACATTGCTCA ATGAGTCAGG GATAAAGGAC 
GAAAATATGT TACGCATACT GGGCGCGAAA ATGTGCTGGC TAAGGTTGCG ACAAAGCAAT 
CCCTTGCTGA CAGTGAAAGT TTTGTATGCC CTGGAAGGCG CAATTGTCGG CGTACATGAA 
GCGGCGCTCC CGGCGAGTCG TCGCCAGGAG CTTGCCGACT GGGCTCATTC GCTTACGGCT 
GGGTAA
 
Protein sequence
MRALSYDRIY KSQEYLASLG TIQYRSLFGS YSLTVEDTVF AMVANGELYL RACEESVPYC 
VKHPPAWLMF MKCGRPVMLN YYRVDESLWR DQQQLVRLSK YSLDAAMKEK HSRILQHRLK 
DLPNMTFHLE TLLNESGIKD ENMLRILGAK MCWLRLRQSN PLLTVKVLYA LEGAIVGVHE 
AALPASRRQE LADWAHSLTA G