Gene SeSA_A1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1100 
Symbol 
ID6518965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1081708 
End bp1082940 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content55% 
IMG OID642746228 
Producthypothetical protein 
Protein accessionYP_002114038 
Protein GI194736176 
COG category[S] Function unknown 
COG ID[COG3214] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGC CGTACCTTTC TCTTTCCCAG GCCCGGTGTC TTCACCTTGC TGCGCAGGGG 
CTATTGAAAA AGCCGCGCCG TAACGCGATG CCTGGCGATG TTCTTGCCGC CATCTCACGC 
ATGGCGTTGT TGCAAATTGA TACCATCAAT GTTGTCGCAC GTAGCCCCTA TCTGGTGCTG 
TTTAGCCGTC TCGGTTCGTA CCCGCAGGCC TGGCTGGATG AGGCGCTGCG ACGCGGCGAG 
TTAATCGAAT ACTGGGCGCA TGAGGCCTGT TTCTTACCAC GCCGCGACTT TAAACTTATC 
CGCCATCGTA TGCTGTCGCC GGAAAAGATG GGCTGGAAAT ATCGCGCGGC ATGGATGCAT 
GAGCACGCGG AAGAAATAGA ACAGCTAGTG CGGCATATTC AGGAGCACGG TCCGGTGCGT 
TCTGCCGATT TTGAGCATGT GCAGAAAGGC GTCAGCGGCT GGTGGGAATG GAAACCACAT 
AAACGCCACC TTGAGGGTTT ATTTACCGCC GGAAAAGTCA TGGTTGTTGA GCGGCGTAAT 
TTTCAACGTG TATATGATTT AACGCCCCGT GTGATGCCGC ACTGGGATGA TGGACGCGAT 
GGACTGTCAC AGTCGCAGGC GGAAAGCCTG ATGCTGGATA ATAGCGCGCG CAGTCTGGGG 
ATTTTCCGTG AACAGTGGCT GGCGGATTAC TACCGCCTGA AACGTCCTGA CCTGAAGGGA 
TGGCGGGAGA GCCGGGCGGA ACAGCAGCAG ATTATTCCGG TCGAGGTGGA AACGTTGGGG 
CGGATGTGGC TTCATGCCGA TCTTCTTTCG CAGCTTGAAC CGGCGCTAAA TAACGCCTTA 
AAAGCGACCC ATAGCGCAGT ACTGTCGCCT TTCGATCCTG TGGTATGGGA TCGCAAGCGG 
GCAGCGCAGC TCTTCGGATT TAACTATCGG CTGGAATGTT ATACGCCTGC GGCGAAGCGC 
CAGTACGGTT ATTTTGTGCT GCCGCTATTA TACCAGGGCC GTTTAGTCGG GCGAATGGAC 
GCCAAAATGC ACCGTAAAAC GGGGGGACTT GAGGTTATCT CGCTGTATCT GGAGGACGAT 
ATTCGTCCTG GCGTTAATCT GCAAAAAGGA ATCTGGCAGG CGATTAGCGC GTTTGCTGCC 
TGGCAACGGG CATCGCGCGT GACGCTGGGA CAATGTCCGC CAGGCCTGTT TAGCGCCATG 
CGTCATGGCT GGGAAATAGA CCCTGCACCA TAA
 
Protein sequence
MSLPYLSLSQ ARCLHLAAQG LLKKPRRNAM PGDVLAAISR MALLQIDTIN VVARSPYLVL 
FSRLGSYPQA WLDEALRRGE LIEYWAHEAC FLPRRDFKLI RHRMLSPEKM GWKYRAAWMH 
EHAEEIEQLV RHIQEHGPVR SADFEHVQKG VSGWWEWKPH KRHLEGLFTA GKVMVVERRN 
FQRVYDLTPR VMPHWDDGRD GLSQSQAESL MLDNSARSLG IFREQWLADY YRLKRPDLKG 
WRESRAEQQQ IIPVEVETLG RMWLHADLLS QLEPALNNAL KATHSAVLSP FDPVVWDRKR 
AAQLFGFNYR LECYTPAAKR QYGYFVLPLL YQGRLVGRMD AKMHRKTGGL EVISLYLEDD 
IRPGVNLQKG IWQAISAFAA WQRASRVTLG QCPPGLFSAM RHGWEIDPAP