Gene SeSA_A1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1066 
Symbol 
ID6516889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp1036863 
End bp1037723 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content56% 
IMG OID642746194 
Productpirin protein 
Protein accessionYP_002114004 
Protein GI194735463 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGA TTACAGGCGT CTATACCGCA CCTCGCCCGC ACTGGGTTGG CGATGGATTT 
CCGGTTCGTT CACTCTTTGC TTATCAGTCA CATGCGCAGC AGTTGAGTCC ATTCCTGCTG 
CTGGATTATG CCGGGCCGCA CACATTTACG CCGGGTAATG AAAAACGCGG CGTTGGAGAG 
CATCCACACC GCGGTTTCGA GACCGTGACG ATTGTTTATA GTGGCGAAGT CGAGCACCGG 
GACTCTACCG GTCGCGGCGG CGTTATCGGC CCGGGCGACG TTCAGTGGAT GACCGCAGGC 
GCAGGCATTT TGCATGAAGA GTTCCACTCC GACGCGTTTA CCCGTCGGGG CGGCGAACTG 
GAAATGGTGC AGTTGTGGGT TAACCTTCCC ATGAAGGACA AAATGACCAC CCCGGGTTAT 
CAAAGCATTA CCCACGATGT TATCCCGACC GTTACGTTGC CGGATGACGC CGGAGTCGTG 
CGGGTCATCG CAGGGCGTTA TGAAGAGACA AAAGGCCCAG CGCACACTTT CTCGCCGCTC 
AATGTCTGGG ATATGCGCCT GCAACGCAAT CGCCAGCTTA CATTGGCACA GCCGGAAGGA 
TGGAGCACCG CGCTGGTGGT ACTGAAAGGC AATATCACGG TGAACGGCAC GACGCCGGTC 
AACGAAGCGC AACTGGTGGT ATTGAGCCAG CAAGGGAAAA CGCTGCACCT TGAGGCCAGC 
AGCGACGCCA GCGTATTGCT GTTATCAGGC GAGCCGCTGA ATGAACCGAT TGTGGGTTAC 
GGCCCATTTG TTATGAACAC GAAACAAGAG ATCGCAGAAG CAGTCCGCGA TTTCAACTCC 
GGCCGTTTTG GCCAAATCTG A
 
Protein sequence
MKQITGVYTA PRPHWVGDGF PVRSLFAYQS HAQQLSPFLL LDYAGPHTFT PGNEKRGVGE 
HPHRGFETVT IVYSGEVEHR DSTGRGGVIG PGDVQWMTAG AGILHEEFHS DAFTRRGGEL 
EMVQLWVNLP MKDKMTTPGY QSITHDVIPT VTLPDDAGVV RVIAGRYEET KGPAHTFSPL 
NVWDMRLQRN RQLTLAQPEG WSTALVVLKG NITVNGTTPV NEAQLVVLSQ QGKTLHLEAS 
SDASVLLLSG EPLNEPIVGY GPFVMNTKQE IAEAVRDFNS GRFGQI