Gene SeSA_A1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1059 
Symbol 
ID6518288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1029012 
End bp1030130 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content53% 
IMG OID642746187 
Productmacrolide transporter subunit MacA 
Protein accessionYP_002113998 
Protein GI194738152 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.75011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.992508 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCTA AGGGAAAGAA ATTTAAAAAG CGTTATCTGG CCATTATTTT AATTCTTTTA 
GTGGGGGGGA TGGTTAGCTG GCGAATGATA AATGCGCCGC TGCCAACTTA TCAGACATTA
ATCGTGCGGC CAGGCGATCT TGAACAGAGT GTACTGGCGA CTGGAAAACT GGACGCGTTG
CGTAAAGTGG ATGTCGGCGC GCAAGTGAGC GGCCAGTTGA AAACGCTGCT GGTCTCCATT
GGAGATAACG TTAAAAAAGA TCAGCTACTC GGCGTGATTG ACCCAGATCA GGCGGAGAAC
CAGATAAAAG AGGTCGAGGC CACCCTGATG GAGCTGAACG CGGAGCGTCA GCAGGCAGCC
GCTGAGTTAA AGCTGGCGCG GGTTACGCTG GCGCGCCAGC AGCAGTTAGC TAAGACTCAG
GCGGTATCGC AACAGGATCT GGATACCGCG GCGACGGAGA TGGCGGTTAA ACAGGCGCGT
ATTGGCACCA TAGATGCCCA GATCAAACGT AATCGGGCCT CGTTGGACAC CGCGAAAACC
AACCTGGAAT ATACCCGTAT TGTTGCCCCC ATGGCGGGGG AAGTGACGCA AATCACTACC
CTGCAAGGAC AAACGGTGAT TGCAGCTCAG CAGGCGCCCA ATATTCTGAC GCTGGCGGAT
ATGAGCACCA TGCTGGTAAA AGCGCAGGTC TCGGAAGCGG ACGTGATCCA TCTTCGGGCG
GGGCAGAAAG CATGGTTCAC CATTGCAGGC GATCCGCAAA CGCGCTATGA AGGCGTTTTA
AAAGATATTC TGCCGACGCC GGAAAAGGTC AACGACGCTA TTTTTTATTA CGCCCGGTTT
GAAGTGCCGA ATCCCAAAAG AATCTTGCGT CTTGATATGA CCGCACAGGT TTATATTCAA
CTCATGGATG TCAAAAATGT GCTGATTATT CCTCTCGCCG CGCTTGGCGA ACCGGTGGGC
GGCAATCGTT ATAAAGTGGC GCTGTTGCGT AACGGCGAAA AACGTGAGCG CGAAGTGGTC
ATTGGCGAGC GTAACGATAC AGACGTGGAA GTGGTTAAAG GTCTGGAAGC GGGCGATGAG
GTGATCATCG GCGAGAGCAG GCCAGGAGCG GCGCCATGA
 
Protein sequence
MRAKGKKFKK RYLAIILILL VGGMVSWRMI NAPLPTYQTL IVRPGDLEQS VLATGKLDAL 
RKVDVGAQVS GQLKTLLVSI GDNVKKDQLL GVIDPDQAEN QIKEVEATLM ELNAERQQAA
AELKLARVTL ARQQQLAKTQ AVSQQDLDTA ATEMAVKQAR IGTIDAQIKR NRASLDTAKT
NLEYTRIVAP MAGEVTQITT LQGQTVIAAQ QAPNILTLAD MSTMLVKAQV SEADVIHLRA
GQKAWFTIAG DPQTRYEGVL KDILPTPEKV NDAIFYYARF EVPNPKRILR LDMTAQVYIQ
LMDVKNVLII PLAALGEPVG GNRYKVALLR NGEKREREVV IGERNDTDVE VVKGLEAGDE
VIIGESRPGA AP