Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1035 |
Symbol | rumB |
ID | 6515250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1006242 |
End bp | 1007369 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746164 |
Product | 23S rRNA methyluridine methyltransferase |
Protein accession | YP_002113975 |
Protein GI | 194734709 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
TIGRFAM ID | [TIGR02085] 23S rRNA (uracil-5-)-methyltransferase RumB |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTGCG CACTCTATGA CGCGGGTCGC TGCCGTTCCT GTCAATGGAT TACGCAGTCG GTTAATGAAC AACTTTCCGC AAAAACAGCC GATTTACATC GTTTGCTGAC CGGGCTGCCT GTTGAACAGT GGTGCGCGTC GATTGGCGGC CCGGAACAGC ATTTCCGCAA CAAAGCGAAA ATGGTCGTGA GCGGTAGTGT AGAAAAACCG CTCTTCGGGA TGCTGCATCG CGACGGTACG CCAGTCGATC TTTGCGGCTG CCCGCTGTAT CCCGCCTCCT TTGCCCCCGT ATTCAGCGCG CTAAAACCTT TTATTGCCCG TGCCGGACTC ACGCCTTATA ACGTGGCGCG AAAACGTGGC GAACTGAAAT ACCTGTTGCT GACGGAAAGT CAGTTCGATG GCGGCATGAT GCTACGCTTC GTGTTGCGTT CAGAAACCAA ACTTACGCAA CTTCGCGCAG CGTTACCGTG GCTGCGTGCG CAACTGCCGC AGCTCAGGGT GATCACCGCA AATATTCAGC CGGTACATAT GGCGATTATG GAAGGGGAGA CGGAAATCTA TCTGACGGAT CAGCAGGCGC TGGCGGAACG TTTTAACGAT GTGCCGCTGT GGATTCGTCC GCAAAGTTTC TTTCAGACCA ACCCTACGGT CGCCAGCCGA TTATATGCAA CGGCGCGCGA TTGGGTAGGG CAACTGCCGG TACGCCATAT GTGGGATCTT TTTTGCGGAG TGGGCGGATT CGGCCTGCAC TGCGCGACGC CGCAGATGCA ATTAACCGGT ATTGAGATCG CGCCGGAGGC GATTGCCTGC GCGAAGCAAT CCGCTGCCGA GCTGGGATTG ACCCGCCTTC ATTTCCAGGC GTTGGATTCC ACCCAATTCG CCACCGCACA AGGCGAAACG CCCGACCTGG TGTTGGTGAA TCCTCCCCGC CGTGGCATTG GCAAGCCGTT GTGCGATTAC CTTGCACAAA TGGCGCCGCG TTTTATTATT TATTCAAGCT GTAACGCGCA GACGATGGCG CAGGATATTC GCCATCTGCC GAACTACCGT ATTCAAAGTG TTCAGCTTTT CGATATGTTC CCGCATACCG CGCATTATGA AGTGTTAACA TTGCTTTGCA GGCTGTAG
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Protein sequence | MQCALYDAGR CRSCQWITQS VNEQLSAKTA DLHRLLTGLP VEQWCASIGG PEQHFRNKAK MVVSGSVEKP LFGMLHRDGT PVDLCGCPLY PASFAPVFSA LKPFIARAGL TPYNVARKRG ELKYLLLTES QFDGGMMLRF VLRSETKLTQ LRAALPWLRA QLPQLRVITA NIQPVHMAIM EGETEIYLTD QQALAERFND VPLWIRPQSF FQTNPTVASR LYATARDWVG QLPVRHMWDL FCGVGGFGLH CATPQMQLTG IEIAPEAIAC AKQSAAELGL TRLHFQALDS TQFATAQGET PDLVLVNPPR RGIGKPLCDY LAQMAPRFII YSSCNAQTMA QDIRHLPNYR IQSVQLFDMF PHTAHYEVLT LLCRL
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