Gene SeSA_A1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1021 
Symbol 
ID6516354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp995102 
End bp995722 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID642746151 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002113962 
Protein GI194735741 
COG category[S] Function unknown 
COG ID[COG3226] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.163661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAA ATGCCGTAAG ACGCGCCAAT GATCCTAAGC GACGGGAAAA AATAATTCAG 
GCCACACTGG AAGCGGTAAA GACCTATGGC GTTCATGCCG TGACGCACCG GAAAATCGCC 
GCTATCGCTC AGGTGCCGCT TGGCTCGATG ACCTACTATT TTGCCGGTAT GGATGCGTTA 
TTGAGTGAAG CTTTTACACT TTTCACCGAG AACATGTCGC GTCAATACCA GGATTTTTTT 
GCGCAGGTGA CGGATGCGGA GGGGGCGTGC CAGGCGATAA CGGAAATGAT TTACGGCTCG 
CAGGTTACGA CGCCGGATAA TATGGCGTTA ATGTATCAGT TATATGCCTA TGCCAGCGAT 
AAGCCAGCGT TAAAAATAGT CATGCAAAAC TGGATGCAGC GTAGCCAGAA TACGCTGGCG 
CAGTGGTTTG ACGCGCAGAC CGCCCGCGCA CTGGATGCGT TTATCGAGGG GATGACGCTG 
CATTTTGTAA CGGATCGAAC GCCGCTGGCG CGTGAAGCGA TTTTACAGAT GGTAAAGCGA 
ATCGCCGGAG AGTCAATGTC GTGTCACTCT GCGTCGGGCA ACAAAAAACC CACCAACCTT 
GAACCGAAAT GGCGGGGTTG A
 
Protein sequence
MKENAVRRAN DPKRREKIIQ ATLEAVKTYG VHAVTHRKIA AIAQVPLGSM TYYFAGMDAL 
LSEAFTLFTE NMSRQYQDFF AQVTDAEGAC QAITEMIYGS QVTTPDNMAL MYQLYAYASD 
KPALKIVMQN WMQRSQNTLA QWFDAQTARA LDAFIEGMTL HFVTDRTPLA REAILQMVKR 
IAGESMSCHS ASGNKKPTNL EPKWRG