Gene SeSA_A0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0982 
Symbol 
ID6518323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp953606 
End bp954493 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content56% 
IMG OID642746114 
Productthreonine and homoserine efflux system 
Protein accessionYP_002113925 
Protein GI194738065 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGGGT CAACACGTAA ACTACCAGTA TGGTTGCCCA TTTTGGTTTT GCTCATTGCC 
ATGTCCTCTA TTCAGAGTGG CGCTTCACTG GCGAAATCAT TATTTCCTCT TGTCGGCGCG 
CCGGGCGTAA CGGCGCTTCG TCTGGCGTTG GGAACGCTTA TCCTTATCGC CTTTTTCAAA 
CCCTGGCGTT TGCGTTTTGC CAAAGAGCAG CGGCTGCCTT TACTGTTTTA TGGTCTGTCG 
CTGGGCGGGA TGAACTATCT ATTCTATCTG TCGATTCAGA CGGTGCCGTT GGGTATTGCG 
GTCGCGCTGG AATTTACCGG CCCTCTGGCG GTCGCGCTGT TTTCATCCCG GCGGCCGGTA 
GATTTTATTT GGGTCGTACT GGCTGTACTT GGACTCTGGT TCCTGCTGCC ATTAGGACAA 
GATATGTCTC ACGTCGATCT TACCGGGGCC GCGTTAGCGC TCGGCGCTGG CGCCTGTTGG 
GCTGTCTATA TTCTTACCGG CCAGCGAGCA GGCGCGGAAC ATGGTCCGGC CACGGTGGCG 
GTAGGCTCGC TGATTGCCGC CATCATTTTC GTGCCGATTG GCGCAGTTCA GGCTGGCGAC 
GCGCTATGGC ACTGGTCGAT TCTTCCCTTA GGGTTAGCGG TCGCTGTGCT TTCTACGGCG 
CTGCCTTATT CACTGGAAAT GATTGCGCTG ACGCGTCTAC CAACCCGCAC CTTCGGTACG 
CTGATGAGCA TGGAACCCGC GCTGGCCGCC GTTTCCGGGA TGATTTTTCT GGGCGAAACG 
CTTACGGGTA TACAAATCAT GGCCCTGTGC GCCATCATTG CCGCCTCAAT GGGATCTACC 
CTAACGATTC GCCGCGAACC GCAAATTAAA CAAGTTGACG TAAAATAG
 
Protein sequence
MPGSTRKLPV WLPILVLLIA MSSIQSGASL AKSLFPLVGA PGVTALRLAL GTLILIAFFK 
PWRLRFAKEQ RLPLLFYGLS LGGMNYLFYL SIQTVPLGIA VALEFTGPLA VALFSSRRPV 
DFIWVVLAVL GLWFLLPLGQ DMSHVDLTGA ALALGAGACW AVYILTGQRA GAEHGPATVA 
VGSLIAAIIF VPIGAVQAGD ALWHWSILPL GLAVAVLSTA LPYSLEMIAL TRLPTRTFGT 
LMSMEPALAA VSGMIFLGET LTGIQIMALC AIIAASMGST LTIRREPQIK QVDVK