Gene SeSA_A0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0965 
Symbol 
ID6518428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp937272 
End bp939008 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content56% 
IMG OID642746097 
ProductABC transporter ATP-binding protein 
Protein accessionYP_002113908 
Protein GI194738238 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG CCGTTATTAC GCTGCACGGT CTGACGAAGC GCTTTGCGGG AATGGATAAA 
CCCGCCGTCG CGCCGCTCGA CTGTACCATT CATTCCGGTT ATGTCACCGG GCTGGTAGGG 
CCGGACGGCG CAGGAAAAAC CACGCTGATG CGTATGCTGG CGGGCCTGCT CAAAGCCGAT 
GGCGGCAACG CGTCCGTATT AGGCTTCGAC CCGATACAAA ACGACAGCGA GCTGCACGCG 
GTTCTGGGCT ATATGCCGCA GAAATTCGGT CTGTATGAAG ATCTTACCGT CATGGAGAAC 
CTTAATCTCT ATGCCGATTT GCGCAGCGTT ACCGGCGAGA TACGGGAAAA GACCTTTGCC 
CGTTTGTTGG AGTTTACCGC CCTCGGCCCT TTCACTGGCC GTCTGGCGGG GAAATTGTCC 
GGCGGGATGA AGCAAAAACT GGGGCTGGCC TGTACGCTGG TCGGCGAACC GAAAGTGCTG 
CTGTTGGATG AACCGGGCGT TGGCGTTGAC CCGATTTCAC GGCGCGAGTT GTGGCAAATG 
GTCCACGAAC TGGCGGGCGA CGGGATGCTG ATTTTATGGA GCACCTCCTA TCTGGATGAA 
GCCGAACAGT GTCGCGATGT GCTGCTGATG AATGAAGGCG AGCTGCTCTA TCAGGGCGAA 
CCTAAAGCGC TGACGCAAAC GATGGCCGGT CGTAGCTTTC TGATGAGCAG TCCACAGGAA 
AACAACCGTA AGTTGCTACA AAGAGCGCTC AGACTGCCGC AGGTGAGCGA CGGCATGATT 
CAGGGACGTT CGGTACGCCT GATCCTGAAA AAAGAGGCGA CCGCAGCAGA TATTCGCCAG 
GCCGAAGGGA TGCCGGAAAT CACCCTCAAT GAGACCGCGC CGCGCTTCGA AGATGCGTTT 
ATCGATCTGC TTGGCGGAGC GGGAACCTCG GAGTCTCCGC TGGGTTCAAT CCTGCATACG 
GTTGAAGGCA CTGCCGGCGA AACGGTGATT GAAGCGCAGG AACTGACGAA AAAATTTGGC 
GATTTCGCGG CCACGGACCA TGTTAATTTC GTCGTACAGC GCGGCGAGAT TTTTGGCCTG 
CTCGGCCCGA ACGGCGCGGG TAAATCAACC ACCTTTAAAA TGATGTGCGG CCTGCTGGTG 
CCGACGTCCG GCAAGGCGCT GGTGCTGGAT ATGGATCTGA AAGTCAGCTC CGGCAAAGCC 
CGTCAGCATC TGGGCTATAT GGCGCAAAAA TTTTCGCTTT ACGGCAACCT GACGGTTGAG 
CAGAACCTGC GTTTTTTCTC CGGCGTCTAC GGTTTGCGGG GCCGCGCGCA AAATGAAAAA 
ATTCAGCGCA TGAGTGAAGC ATTTGGTCTG AAAAGCATCG CGTCGCATCC CACCGATGCG 
CTGCCACTGG GTTTTAAACA GCGACTGGCG CTGGCCTGCT CGCTGATGCA CGAACCGGAT 
ATTTTATTCC TTGATGAACC AACATCCGGG GTTGATCCCC TCACCCGCCG TGAATTTTGG 
CTGCACATTA ATAGCATGGT GGAAAAAGGG GTCACGGTAA TGGTGACGAC CCACTTTATG 
GATGAGGCGG AATATTGCGA TCGCATCGGA CTGGTTTATC GTGGGAAGCT TATCGCCAGC 
GGTACGCCGG ACGATCTCAA AGCGCAGGCC GCCGATGAGC AACAGGCCGA TCCGACGATG 
GAGCAGGCCT TTATCACTCT CATCAATGAC TGGGATAAGG AGCATACGCA TGAGTAA
 
Protein sequence
MSEAVITLHG LTKRFAGMDK PAVAPLDCTI HSGYVTGLVG PDGAGKTTLM RMLAGLLKAD 
GGNASVLGFD PIQNDSELHA VLGYMPQKFG LYEDLTVMEN LNLYADLRSV TGEIREKTFA 
RLLEFTALGP FTGRLAGKLS GGMKQKLGLA CTLVGEPKVL LLDEPGVGVD PISRRELWQM 
VHELAGDGML ILWSTSYLDE AEQCRDVLLM NEGELLYQGE PKALTQTMAG RSFLMSSPQE 
NNRKLLQRAL RLPQVSDGMI QGRSVRLILK KEATAADIRQ AEGMPEITLN ETAPRFEDAF 
IDLLGGAGTS ESPLGSILHT VEGTAGETVI EAQELTKKFG DFAATDHVNF VVQRGEIFGL 
LGPNGAGKST TFKMMCGLLV PTSGKALVLD MDLKVSSGKA RQHLGYMAQK FSLYGNLTVE 
QNLRFFSGVY GLRGRAQNEK IQRMSEAFGL KSIASHPTDA LPLGFKQRLA LACSLMHEPD 
ILFLDEPTSG VDPLTRREFW LHINSMVEKG VTVMVTTHFM DEAEYCDRIG LVYRGKLIAS 
GTPDDLKAQA ADEQQADPTM EQAFITLIND WDKEHTHE