Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A0948 |
Symbol | uvrB |
ID | 6518091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 920564 |
End bp | 922585 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642746080 |
Product | excinuclease ABC subunit B |
Protein accession | YP_002113891 |
Protein GI | 194735904 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00408059 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAC CGTTCAAACT GAATTCCGCT TTTAAACCTT CTGGCGATCA GCCGGACGCT ATACGTCGTC TGGAAGAAGG GCTGGAGGAC GGGCTGGCGC ATCAGACGTT ATTGGGCGTG ACCGGTTCCG GGAAGACATT CACCATTGCC AACGTCATTG CGGACTTGCA GCGGCCAACG ATGGTGCTTG CGCCCAATAA AACCCTGGCG GCGCAGCTCT ACGGCGAAAT GAAAGAGTTT TTCCCGGAAA ACGCGGTGGA GTATTTCGTC TCCTACTATG ACTACTATCA GCCGGAAGCG TATGTGCCAA GTTCGGATAC GTTTATCGAA AAAGACGCTT CGGTAAACGA ACATATTGAG CAAATGCGGT TGTCGGCAAC GAAAGCGTTG CTTGAGCGAC GCGATGTCGT GGTGGTGGCT TCCGTGTCCG CGATTTACGG TCTGGGCGAT CCGGATCTCT ACCTGAAAAT GATGCTGCAT CTGACGGTGG GAATGCTGAT TGACCAGCGC GCGATTTTGC GTCGGCTGGC GGAATTGCAA TACACCCGTA ACGATCAAGC TTTTCAGCGT GGTACCTTTC GCGTGCGCGG CGAAGTGATC GACATCTTCC CGGCTGAATC TGACGATATC GCGCTACGCG TTGAGCTGTT TGATGAAGAA GTGGAACGCC TGTCGCTGTT CGACCCGTTA ACCGGGCAGG TAGAGTCAAC GGTGCCACGT TATACTATCT ATCCCAAAAC GCACTACGTG ACGCCGCGCG AGCGTATTCT GCAGGCGATG GAAGAGATAA AAGATGAGCT GGCGGACAGG CGTAAGGTCT TGCTGGCGAA TAATAAGCTG CTTGAAGAGC AGCGATTAAG CCAGCGCACG CAGTTCGATT TAGAGATGAT GAACGAGCTG GGCTACTGCT CAGGCATTGA AAACTATTCC CGCTTTCTGT CGGGCCGCGG GCCGGGCGAA CCGCCGCCAA CCTTGTTCGA TTATCTGCCC GCCGACGGAC TGCTGGTGGT GGATGAGTCT CATGTCACCA TCCCGCAGAT AGGCGGCATG TACCGCGGCG ACCGGGCGCG CAAAGAGACG CTGGTCGAGT ATGGCTTCCG TCTGCCTTCG GCGCTGGATA ACCGTCCGCT GAAGTTTGAG GAGTTTGAAG CCTTAGCGCC GCAAACTATC TATGTTTCCG CCACGCCCGG CAACTATGAG CTGGAAAAAT CTGGTGATGA GGTGGTGGAT CAGGTCGTGC GACCGACCGG GCTGCTGGAC CCGATTATTG AAGTGCGTCC GGTGGCGACC CAGGTGGACG ATCTGCTGTC CGAAATTCGT CAGCGTGCGG CCATTAATGA GCGTGTCCTT GTCACTACGC TTACCAAACG GATGGCGGAA GATTTGACCG AATATCTGGA AGAACACGGC GAGCGCGTGC GTTACCTGCA CTCAGATATT GATACCGTGG AGCGCATGGA AATCATCCGC GATTTGCGTC TGGGCGAGTT TGACGTTCTG GTGGGGATTA ACCTGCTGCG CGAAGGGCTG GATATGCCGG AAGTCTCGCT GGTGGCGATT CTGGACGCCG ATAAAGAGGG CTTCCTGCGC TCCGAGCGCT CCCTGATTCA GACCATAGGA CGCGCGGCGC GTAACGTTAA TGGTAAAGCG ATTCTGTATG GCGATAAAAT CACGCCGTCG ATGGCGAAGG CGATTGGCGA AACCGAGCGA CGTCGCGAGA AGCAGCAGAA GTACAACGAA GAGCACGGTA TCACTCCGCA GGGGCTGAAT AAAAAAGTGG TCGACATCCT GGCGCTGGGG CAGAACATTG CGAAAACCAA AGCGAAGGGG AAAGGCAAGG GCCGTTCTAC GGCAAAAGCC GGAATTGTCG AACTGGATAT GACGCCGAAA GCGTTGCAGC AGAAAATTCA TGAACTGGAA GGGCAAATGA TGCAGCACGC GCAAAATCTG GAGTTTGAAG AAGCCGCGCA AATTCGCGAC CAGTTGCACC AGTTACGCGA GTTGTTTATC GCGGCGTCCT GA
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Protein sequence | MSKPFKLNSA FKPSGDQPDA IRRLEEGLED GLAHQTLLGV TGSGKTFTIA NVIADLQRPT MVLAPNKTLA AQLYGEMKEF FPENAVEYFV SYYDYYQPEA YVPSSDTFIE KDASVNEHIE QMRLSATKAL LERRDVVVVA SVSAIYGLGD PDLYLKMMLH LTVGMLIDQR AILRRLAELQ YTRNDQAFQR GTFRVRGEVI DIFPAESDDI ALRVELFDEE VERLSLFDPL TGQVESTVPR YTIYPKTHYV TPRERILQAM EEIKDELADR RKVLLANNKL LEEQRLSQRT QFDLEMMNEL GYCSGIENYS RFLSGRGPGE PPPTLFDYLP ADGLLVVDES HVTIPQIGGM YRGDRARKET LVEYGFRLPS ALDNRPLKFE EFEALAPQTI YVSATPGNYE LEKSGDEVVD QVVRPTGLLD PIIEVRPVAT QVDDLLSEIR QRAAINERVL VTTLTKRMAE DLTEYLEEHG ERVRYLHSDI DTVERMEIIR DLRLGEFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR SERSLIQTIG RAARNVNGKA ILYGDKITPS MAKAIGETER RREKQQKYNE EHGITPQGLN KKVVDILALG QNIAKTKAKG KGKGRSTAKA GIVELDMTPK ALQQKIHELE GQMMQHAQNL EFEEAAQIRD QLHQLRELFI AAS
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