Gene SeSA_A0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A0866 
Symbol 
ID6519756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp840578 
End bp841999 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content57% 
IMG OID642746000 
Productdeoxyribodipyrimidine photolyase 
Protein accessionYP_002113816 
Protein GI194736598 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.55052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC ATTTAGTCTG GTTCAGGCGC GATCTGCGTT TACAGGATAA CCTTGCGCTG 
GCCGCCGCCT GCCGCGATGC ATCCGCGCGA GTGCTGGCGC TTTATATTTC CACCCCCGCG
CAGTGGCAGG CTCATGATAT GGCGCCGCGG CAGGCGGCAT TCATCAGCGC GCAGCTCAAT
GCGCTACAGA CGGCCCTTGC AGAGAAAGGG ATTCCGCTGC TGTTTCATGA AGTGGCGGAT
TTTAACGCCA GTATTGAAAC GGTCAAAAAC GTTTGCCGAC AGCATGACGT CAGCCATCTG
TTTTATAACT ATCAGTATGA GTTTAACGAG CGTCAGCGTG ATGCGGCGGT GGAAAAAACG
CTGCCCTCTG TCATCTGCGA AGGCTTTGAC GATAGCGTGA TTCTGGCGCC CGGCGCGGTG
ATGACCGGCA ATCATGAAAT GTATAAAGTT TTTACGCCGT TTAAAAACGC CTGGTTGAAA
CGGCTAAAAG AGGATATCCC GCCGTGCGTT CCGGCCCCGA AGATCCGGGT GAGCGGCGCG
CTTTCTACAC CCTTAACGCC AGTCTCGCTT AACTACCCGC AACAGGCGTT TGACGCCGCG
CTTTTCCCGG TGGAAGAAAA CGCGGTTATC GCGCAGCTAC GTCAGTTTTG CGCGCAGGGC
GCAGACGAGT ATGAGTCACA GCGGGATTTC CCTGCGGTCG ACGGCACCAG TCGGCTTTCC
GCCAGCCTGG CGACGGGTGG CCTGTCGCCG CGACAGTGCC TGCACCGATT ACTGGCGGAG
CAGCCGCAGG CGCTGGACGG CGGACCGGGA AGCGTCTGGT TGAATGAACT CATCTGGCGG
GAATTTTACC GTCATTTAAT GACCTGGTAT CCGGCATTAT GCAAACACCA GCCGTTTATC
CGCTGGACAA AACGCGTCGC GTGGCAGGAG AACCCGCACT ATTTTCAGGC ATGGCAGAAA
GGCGAAACCG GTTATCCCAT TGTCGATGCG GCGATGCGCC AGCTTAACGC GACGGGCTGG
ATGCATAACC GTTTACGCAT GATTACCGCC AGCTTTCTGG TAAAAGATCT GTTGATTGAC
TGGCGGTTGG GGGAGCGCTA TTTCATGTCG CAGCTTATTG ACGGCGATCT TGCCGCCAAT
AATGGCGGCT GGCAGTGGGC CGCCTCAACC GGTACTGATG CCGCGCCTTA TTTTCGTATT
TTTAATCCCA CGACTCAGGG AGAGAGGTTC GATCGCGACG GCGAATTTAT CCGCCAGTGG
CTACCGGCAT TACGCGATAT CCCTGGAAAA GCGATTCACG AGCCGTGGCG GTGGGCGGAA
AAAGCGGGAG TCGTGCTTGA TTATCCTCGG CCCATTGTTG AACACAAACA GGCGAGAATC
GCGACGCTTT CCGCCTATGA GGCGGCGAGA AAAGGGGCGT GA
 
Protein sequence
MPTHLVWFRR DLRLQDNLAL AAACRDASAR VLALYISTPA QWQAHDMAPR QAAFISAQLN 
ALQTALAEKG IPLLFHEVAD FNASIETVKN VCRQHDVSHL FYNYQYEFNE RQRDAAVEKT
LPSVICEGFD DSVILAPGAV MTGNHEMYKV FTPFKNAWLK RLKEDIPPCV PAPKIRVSGA
LSTPLTPVSL NYPQQAFDAA LFPVEENAVI AQLRQFCAQG ADEYESQRDF PAVDGTSRLS
ASLATGGLSP RQCLHRLLAE QPQALDGGPG SVWLNELIWR EFYRHLMTWY PALCKHQPFI
RWTKRVAWQE NPHYFQAWQK GETGYPIVDA AMRQLNATGW MHNRLRMITA SFLVKDLLID
WRLGERYFMS QLIDGDLAAN NGGWQWAAST GTDAAPYFRI FNPTTQGERF DRDGEFIRQW
LPALRDIPGK AIHEPWRWAE KAGVVLDYPR PIVEHKQARI ATLSAYEAAR KGA